|
Bacterial and virus strains
|
|
S. praecaptivus wild type |
ATCC |
BAA-2554 |
|
S. praecaptivus MC1 |
This paper |
CD 2555 |
|
S. praecaptivus 101 |
36
|
CD 101 |
|
S. praecaptivus ΔpheA-tyrA
|
This paper |
CD 1663 |
|
S. praecaptivus ΔtyrR
|
This paper |
CD 1987 |
|
S. praecaptivus ΔnuoN
|
This paper |
CD 1728 |
|
S. praecaptivus Δmdh
|
This paper |
CD 1993 |
|
S. praecaptivus Δppc
|
This paper |
CD 2131 |
|
S. praecaptivus ΔptsHIcrr
|
This paper |
CD 1991 |
|
S. praecaptivus ΔcsrA
|
This paper |
CD 708 |
|
S. praecaptivus Δzwf
|
This paper |
CD 1989 |
|
S. praecaptivus MC1 ΔypeI
|
This paper |
CD 2565 |
|
Biological samples
|
|
Sitophilus zeamais
|
USDA, Manhattan, KS, U.S.A. https://www.ars.usda.gov/plains-area/mhk/cgahr/
|
N/A |
|
Oligonucleotides
|
| See Table S2, Oligonucleotides used in this study |
N/A |
N/A |
|
Recombinant DNA
|
| Plasmid pRed/Gamm (CAT) |
84
|
N/A |
|
Software and Algorithms
|
| Adobe Illustrator |
N/A |
https://www.adobe.com/products/illustrator.html
|
| Imaris Viewer |
N/A |
https://imaris.oxinst.com/imaris-viewer
|
| Geneious Prime 2022.0.2 |
N/A |
https://www.geneious.com
|
| BBDuk |
N/A |
https://jgi.doe.gov/data-and-tools/bbtools/bb-tools-user-guide/
|
| SPAdes assembler |
N/A |
92
|
| Image J 1.53a |
N/A |
https://imagej.nih.gov/ij/
|
|
Deposited Data
|
|
S. praecaptivus MC1 sequence reads |
This paper |
SRA: SAMN26947704 |
|
S. praecaptivus ΔtyrR sequence reads |
This paper |
SRA: SAMN26947706 |
|
S. praecaptivus ΔpheA-tyrA sequence reads |
This paper |
SRA: SAMN26947705 |
