Table 1:
Data sources for assembling the IDSL.GOA knowledgebase.
Resource | Address | Information |
---|---|---|
Gene Ontology | http://purl.obolibrary.org/obo/go.obo | GO-GO |
Expasy Enzyme | https://ftp.expasy.org/databases/enzyme/enzyme.dat | EC Numbers |
NCBI Gene Accession | https://ftp.ncbi.nlm.nih.gov/gene/DATA/gene2accession.gz | Gene - Transcript Transcript - Protein |
NCBI Gene GO Annotation | https://ftp.ncbi.nlm.nih.gov/gene/DATA/gene2go.gz | Gene - GO |
NCBI PubChem | https://pubchem.ncbi.nlm.nih.gov/ | EC-compounds |
Note: These information were accessed in December 2023.