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. 2023 Apr 7;11:e14936. doi: 10.7717/peerj.14936

Table 3. Binding free energy (kJ/mol) calculation of complex C1, C2, C3, C4, and C5 determine by MMGBSA.

Interactions PGAM1- C1 PGAM1- C2 PGAM1- C3 PGAM1- C4 PGAM1- C5
ΔGvdW −29.61 ± 0.17 −37.42 ± 0.26 −42.36 ± 0.19 −17.79 ± 0.35 −35.96 ± 0.32
ΔGele −21.66 ± 0.57 −19.64 ± 0.29 −21.39 ± 0.34 −13.24 ± 0.72 −15.17 ± 0.50
ΔGGB 38.31 ± 0.49 25.04 ± 0.29 27.41 ± 0.25 25.98 ± 0.71 19.33 ± 0.28
ΔGsurf −4.09 ± 0.02 −5.09 ± 0.02 −5.18 ± 0.01 −2.16 ± 0.04 −4.99 ± 0.04
ΔGgas −51.27 ± 0.55 −57.06 ± 0.32 −63.76 ± 0.33 −31.04 ± 0.55 −51.13 ± 0.74
ΔGsolv 34.21 ± 0.48 19.94 ± 0.29 22.22 ± 0.25 23.81 ± 0.73 14.34 ± 0.26
ΔGtotal −17.05 ± 0.23 −37.11 ± 0.36 −41.53 ± 0.39 −7.22 ± 0.34 −36.79 ± 0.62