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. 2023 Feb 25;51(6):2586–2601. doi: 10.1093/nar/gkad100

Table 1.

Spectral properties of the dyes in complexes with the aptamers

Φ_Mango-dye (r.u.)b Brightness_Mango-dye (M−1cm−1)b,c
Dye Free dye abs. max (nm) Free dyea ϵ (M−1cm−1) Mango-dye λex (nm) Mango-dye λem (nm) Mango II Mango IV Mango II Mango IV
TO1-biotin 495 77500 505 540 0.39 0.43 29200 32200
4a 495 77500 505 540 0.42 0.32 29400 19900
4b 535 62400 560 615 0.44 0.29 26200 15900
580 101100 595 640 0.07 0.05 7100 5400
4d 580 51300 595 650 0.14 0.10 6400 4700

aMolar extinction at absorbance maximum of the free dye.

bConditions: 5 μM Mango aptamer, 5 μM dye, 10 mM Tris–HCl, pH 7.5, and 140 mM КСl.

cBrightness = molar extinction (ϵ) at complex max*Ф.