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. 2023 Apr 11;5:24. doi: 10.1186/s42523-023-00244-w

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© The Author(s) 2023

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — Redundancy analysis (RDA) triplots show the association between the variation of gene expression and environmental variables, focusing on samples from ileum on day 27 (A) and day 44 (B), as well as caecum (C) on day 44. Blue and yellow colours represent control (Ctrl) and treated (ROM) groups, respectively. Dark grey arrows indicate environmental variables and light grey arrows show genes for which variation in expression levels is best explained in the model. The percentages at the axes indicate the variation explained by the first two canonical axes