Antibodies
|
Mouse monoclonal anti‐Gαi‐GTP |
Graeme Milligan (Lane et al, 2008) |
26901 |
Rabbit anti‐Arf1 |
Paul Randazzo (Marshansky et al, 1997) |
n/a |
Rabbit anti‐Mannosidase (Man)‐II |
Gift from K. Moreman (Velasco et al, 1993) |
n/a |
Anti‐GFP |
Living Colors, Invitrogen (Thermo Scientific) |
Catalog # MA5‐15256 |
Anti‐RFP |
Invitrogen (Thermo Scientific) |
Catalog # MA5‐15257 |
Anti‐GIV coiled coil antibody |
Millipore (Sigma) |
ABT80 |
Goat anti‐Rabbit IgG, Alexa Fluor 594 conjugated |
Thermo Fisher Scientific |
A11072 |
Goat anti‐Mouse IgG, Alexa Fluor 488 conjugated |
Thermo Fisher Scientific |
A11017 |
IRDye 800CW Goat anti‐Mouse IgG Secondary (1:10,000) |
LI‐COR Biosciences |
926‐32210 |
IRDye 680RD Goat anti‐Rabbit IgG Secondary (1:10,000) |
LI‐COR Biosciences |
926‐68071 |
Biological samples
|
N/a |
|
|
Chemicals, peptides, and recombinant proteins
|
DAPI (4′,6‐Diamidino‐2‐Phenylindole, Dilactate) |
Thermo Fisher Scientific |
D3571 |
MTT |
Millipore Sigma |
475989‐1GM |
Puromycin |
Sigma |
P9620‐10ML |
Brefeldin A |
Sigma |
B6542‐5MG |
Fetal Bovine Serum |
PEAK SERUM |
PS‐FB1 |
Paraformaldehyde 16% |
Electron Microscopy Biosciences |
15710 |
Glutathione Sepharoseâ 4B |
Sigma–Aldrich |
GE17‐0756‐04 |
Protease inhibitor cocktail |
Roche |
11 873 580 001 |
Tyr phosphatase inhibitor cocktail |
Sigma–Aldrich |
P5726 |
Ser/Thr phosphatase inhibitor cocktail |
Sigma–Aldrich |
P0044 |
PVDF Transfer Membrane, 0.45 mM |
Thermo Scientific |
88518 |
Prolong Glass |
Thermo Fisher Scientific |
P36980 |
Paraformaldehyde 16% |
Electron Microscopy Biosciences |
15710 |
Guava Cell Cycle Reagent |
Millipore Sigma |
4700‐0160 |
Commercial kits
|
Dead Cell Apoptosis Kit with Annexin V Alexa Fluor™ 488 & Propidium Iodide (PI) |
Thermo Fisher Scientific |
V13241 |
Experimental models: Cell lines
|
HeLa parental |
ATCC |
ATCC® CCL‐2 |
HeLa GIV KO (CRISPR Cas9) |
Prior work (Abd El‐Hafeez et al, 2023) |
n/a |
MDA‐MB‐231 |
ATCC |
ATCC® HTB‐26 |
MDA‐MB‐231 parental and GIV KO (CRISPR Cas9) lines |
Prior work (Abd El‐Hafeez et al, 2023) |
n/a |
HeLa shControl |
Prior work (Lo et al, 2015; Lopez‐Sanchez et al, 2015; Rohena et al, 2020) |
n/a |
HeLa shGIV |
Prior work (Rohena et al, 2020) |
n/a |
Cos7 shControl |
Prior work (Ma et al, 2015; Rohena et al, 2020) |
n/a |
Cos7 shGIV |
Prior work (Ma et al, 2015; Rohena et al, 2020) |
n/a |
COS7 |
ATCC |
ATCC® CRL‐1651™ |
HEK293T |
ATCC |
ATCC® CRL‐1573™ |
Recombinant DNA
|
Internally tagged Gαi1‐YFP |
Moritz Bünemann (Bunemann et al, 2003; Gibson & Gilman, 2006; Lo et al, 2015; Midde et al, 2015) |
N/A |
Girdin CRISPR/Cas9 KO Plasmid (h2) |
Santa Cruz Biotechnology (SCBT) Inc. |
Sc‐402236‐KO‐2 |
CFP‐Gβ1
|
Lo et al (2015) |
N/A |
Temperature sensitive (ts)VSVG‐eGFP |
Lo et al (2015) |
N/A |
MMP2‐GFP |
Marc Coppolino (Kean et al, 2009) |
N/A |
MMP9‐GFP |
Marc Coppolino (Kean et al, 2009) |
N/A |
Col VII‐RFP |
Anderzej Fertala (Chung et al, 2009) |
N/A |
GST GAT (GGA) |
Stuart Kornfeld (Dell'Angelica et al, 2000) |
N/A |
Other: Software
|
ImageJ |
National Institute of Health |
https://imagej.net/Welcome
|
IX81 FV1000 inverted confocal laser scanning microscope |
Olympus |
n/a |
ClueGO |
Cytoscape |
Bindea et al (2009) |
NetworkX |
Python |
https://networkx.org
|
Gephi |
Gephi |
https://gephi.org
|
Prism |
GraphPad |
https://www.graphpad.com/scientific‐software/prism/
|
LAS‐X |
Leica |
www.leica‐microsystems.com/products/microscope‐software/p/leica‐las‐x‐ls
|
Illustrator |
Adobe |
https://www.adobe.com/products/illustrator.html
|
MATLAB |
MathWorks |
https://www.mathworks.com/
|
ImageStudio Lite |
LI‐COR |
https://www.licor.com/bio/image‐studio‐lite/
|