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. 2023 Mar 29;12(7):1043. doi: 10.3390/cells12071043

Table 4.

Changes in gene regulation of endothelial cells exposed to microgravity conditions.

Cell Type Gene Regulation Microgravity Reference
Human
microvascular endothelial cell line HMEC-1
Differentially regulated Hallmark collection gene sets:
Up: HALLMARK_ADIPOGENESIS, HALLMARK_
ALLOGRAFT_REJECTION, HALLMARK_
ANDROGEN_RESPONSE, HALLMARK_BILE_ACID_
METABOLISM, HALLMARK_CHOLESTEROL_
HOMEOSTASIS, HALLMARK_COAGULATION,
HALLMARK_E2F_TARGETS,
HALLMARK_FATTY_ACID_METABOLISM,
HALLMARK_G2M_CHECKPOINT, HALLMARK_
MITOTIC_SPINDLE, HALLMARK_MTORC1_SIGNALING, HALLMARK_MYC_TARGETS_V1, HALLMARK_
OXIDATIVE_PHOSPHORYLATION, HALLMARK_
PEROXISOME, HALLMARK_PI3K_AKT_MTOR_
SIGNALING, HALLMARK_PROTEIN_SECRETION, HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY, HALLMARK_SPERMATOGENESIS, HALLMARK_UV_
RESPONSE_DN
Down: HALLMARK_ESTROGEN_RESPONSE_EARLY, HALLMARK_ESTROGEN_RESPONSE_LATE,
HALLMARK_HEDGEHOG_SIGNALING,
HALLMARK_HYPOXIA, HALLMARK_IL2_STAT5_
SIGNALING, HALLMARK_KRAS_SIGNALING_DN, HALLMARK_MYOGENESIS, HALLMARK_NOTCH_
SIGNALING, HALLMARK_P53_PATHWAY,
HALLMARK_TNFA_SIGNALING_VIA_NFKB,
HALLMARK_UV_RESPONSE_UP,
HALLMARK_WNT_BETA_CATENIN_SIGNALING
r-µg on the ISS for 160 h [108]
HUVECs 585 genes significantly upregulated (top 5: TXNIP, MIR15A, ANAPC1, TP53INP1, ID1); 438 genes significantly downregulated (top 5: HSPA1A and -B, HSP90AA2, ATF3, CLCA2, RYBP) r-µg on the ISS for 10 d [109]
HUVECs Early upregulation of HSPA1A only after 4 days, string upregulation of TXNIP after 10 days s-µg on the RWV for 4 and 10 d [110]
HUVECs Downregulation of SLCO2A1 s-µg on a clinostat for 7 d [111]
HUVECs No significant difference in TP53 gene expression s-µg on a clinostat for 24, 48, and 73 h [112]
HUVECs Upregulated miRNAs: hsa-miR-628-3p, hsa-miR-3195, hsa-miR-3687, hsa-miR-1257, hsa-miR-3614-5p s-µg on a clinostat for 48 h [113]
HUVECs Upregulation of miR-22 after 72 h, concurrent downregulation of SRF and LAMC1 s-µg on a HARV for 48, 72 and 96 h [114]
HUVECs 1870 differentially expressed miRNAs; hsa-mir-496, hsa-mir-151a, hsa-miR-296-3p, hsa-mir-148a, hsa-miR-365b-5p, hsamiR-3687, hsa-mir-454, hsa-miR-155-5p, and hsa-miR-145-5p involved in cell adhesion, angiogenesis, cell cycle, JAK-STAT signaling, MAPK signaling, nitric oxide signaling, VEGF signaling, and wound healing pathways s-µg on a 3D-clinostat for 2 h [115]
Human CVECs Upregulation of BAX, CASP3, and CYP2D6 after 1 and 3 days
Downregulation of BCL2 after 1 and 3 days
s-µg on an RCCS for 1 and 3 d [116]
EA.hy926 Upregulation of CXCL8 and FN1 in spheroids s-µg on an RPM for 35 d [117]
EA.hy926 Differential regulation of TIMP1, IL6, CXCL8, CCL2, B2M r-µg on the ISS for 12 d [118]
EA.hy926 Top 20 upregulated genes in EA.hy926 exosomes: ACTB, PGK1, HSPA8, RPL7A, FTH1, GAPDH, HSP90AB1, RPL37A, TPI1, FABP4, S100A6, TOT1, TUBA1B, RPS4X, RPL5, HNRNPK, RPS3A, RPS2, HNRNPA1 r-µg on the SJ-10 Recoverable Scientific Satellite for 3 and 10 d [119]
Human peripheral blood-derived endothelial progenitor cells Increase in HIF1A and NOS3 after 12 and 24 h, then decrease after 48 h s-µg on a 3D-clinostat for 24 h [120]

Abbreviations: Days (d); high aspect ratio vessels (HARV); head-down tilt (HDT); hours (h); International Space Station (ISS); random positioning machine (RPM); real microgravity (r-µg); rotating cell culture system (RCCS); simulated microgravity (s-µg); three-dimensional (3D).