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. 2023 Mar 27;28(7):2989. doi: 10.3390/molecules28072989

Table 2.

Table displaying docking interactions and bond distances of the top scoring ligands with the active site of the target protein.

Ligand Name Residues Involved in Interaction Type of Interaction Bond Distance (Å)
Cepharantine LIG:C---HIS457:O Carbon Hydrogen Bond 2.99
HIS575:NE2---LIG Pi-Cation 4.64
LIG:H---HIS459 Pi-Cation; Pi-Donor Hydrogen Bond 2.89
ILE489:HN---LIG Pi-Donor Hydrogen Bond 2.60
HIS575---LIG Pi-Pi T-shaped 4.64
LIG:C---PRO580 Alkyl 3.65
HIS430---LIG:C Pi-Alkyl 5.01
HIS575---LIG:C Pi-Alkyl 4.64
LIG---ILE489 Pi-Alkyl 4.76
LIG---LEU491 Pi-Alkyl 5.30
Zafirlukast ASN318:HD21---LIG:O Hydrogen Bond 2.05
HIS575:HD1---LIG:O Hydrogen Bond 2.46
HIS575:HD1---LIG:O Hydrogen Bond 2.09
LIG:H---ILE489:O Hydrogen Bond 2.11
PRO580:CD---LIG:O Carbon Hydrogen Bond 3.70
LIG:C---THR458:O Carbon Hydrogen Bond 3.23
ILE489:HN---LIG Pi-Donor Hydrogen Bond 2.61
GLY490:CA---LIG Pi-Sigma 3.64
VAL284---LIG Alkyl 4.91
VAL324---LIG Alkyl 4.70
LIG:C---ILE489 Alkyl 4.55
LIG:C---ILE489 Alkyl 4.81
HIS319---LIG Pi-Alkyl 5.42
LIG--- ILE489 Pi-Alkyl 4.70
LIG---LEU491 Pi-Alkyl 5.34
Atovaquone ASN318:HD21---LIG:O Hydrogen Bond 2.57
ASN318:HD22---LIG:O Hydrogen Bond 2.76
TYR488:HH---LIG:O Hydrogen Bond 2.35
HIS457:CE1---LIG:O Carbon Hydrogen Bond 3.75
HIS282:NE2---LIG Pi-Cation 4.87
HIS319:NE2---LIG Pi-Cation 3.68
HIS319:HE2---LIG Pi-Cation; Pi-Donor Hydrogen Bond 3.08
ILE489:HN---LIG Pi-Donor Hydrogen Bond 2.60
HIS319---LIG Pi-Pi T-shaped 4.52
LIG:CL---VAL460 Alkyl 5.40
LIG:CL---LEU491 Alkyl 4.24
HIS459---LIG Pi-Alkyl 5.11
TYR488---LIG Pi-Alkyl 5.03
HIS575---LIG:CL Pi-Alkyl 4.93
LIG---VAL284 Pi-Alkyl 5.27
LIG---VAL324 Pi-Alkyl 4.85
LIG---ILE489 Pi-Alkyl 4.56