Table 8. Straw and baselines models experiment on BiComp-DTA for the Davis dataset.
| Experiments | CI(std) | MSE | CI loss | MSE loss | |
|---|---|---|---|---|---|
| Straw models | S1 | 0.506 (0.004) | 0.794 | 44% | 0.557 |
| S2 | 0.501 (0.015) | 0.811 | 44% | 0.574 | |
| S3 | 0.494 (0.003) | 1.289 | 44% | 1.052 | |
| Baselines | KNN | 0.845 (0.002) | 0.364 | 6% | 0.127 |
| RF | 0.868 (0.001) | 0.317 | 3% | 0.080 | |
| FC | 0.855 (0.003) | 2.790 | 5% | 2.553 | |
| BiComp-DTA | 0.904 (0.001) | 0.237 | - | - | |
S1, S2, and S3 denote different models, for which, the model training and testing are performed on the shuffled binding affinity values, the model training is performed on the shuffled binding values, and the model testing is performed on the shuffled binding values, respectively. KNN, RF, and FC denote k-nearest neighbors algorithm, random forests, and fully-connected neural network, respectively