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. 2023 Feb 15;11(2):e04179-22. doi: 10.1128/spectrum.04179-22

TABLE 1.

Mass spectrometric analysis of canonical deubiquitination activity effectors in L. longbeachae

Protein name Gene name MWa (kDa) Protein score Sequence coverage (%) No. of unique peptides No. of peptides Ub-VME no. of PSMs Control no. of PSMs
Uncharacterized protein LLO_1369 87.53 104.19 4.40 3 3 3
Putative coiled coil protein LLO_1631 81.93 499.41 21.52 15 15 15 8
Uncharacterized protein LLO_0794 127.73 719.54 16.88 17 17 18 10
Uncharacterized protein LLO_3118 31.60 513.91 52.46 10 10 11 5
Uncharacterized protein LLO_2210 89.89 127.53 5.70 5 5 5
Uncharacterized protein LLO_2179 59.59 701.41 30.60 17 17 20 5
Uncharacterized protein LLO_2985 60.15 997.52 34.80 17 19 25 10
Putative coiled-coil protein, similar to eukaryotic protein LLO_2313 209.85 98.44 1.93 2 3 3
Uncharacterized protein LLO_2238 67.45 189.76 10.33 6 6 6
Homologous to SidE substrate of Dot/Icm secretion system LLO_0424 169.36 1,710.78 31.56 25 41 49 8
Homologous to SidE substrate of Dot/Icm secretion system LLO_0426 176.37 5,386.95 65.04 75 94 134 13
Homologous to SidE substrate of Dot/Icm secretion system LLO_3092 177.83 3,845.64 55.30 61 76 99 5
Similar to Sid proteins LLO_3095 169.01 4,171.46 61.16 7 82 103
a

MW, molecular weight.