TABLE 3.
Primer sets used during qPCR analysis of chickpea defensive genes
Gene ID | Gene name | Function | Primers | Reference |
---|---|---|---|---|
EU529707 | ACT1 | Housekeeping gene | F-GCCTGATGGACAGGTGATCAC | 35 |
R-GGAACAGGACCTCTGGACATCT | ||||
CHI1 | Hydrolysis of chitin (main component of fungal cell wall) | F-AAGGCTTTGGTGCAACCATT | Designed by using Primer3 v.0.4.0 (36) | |
R-CACCAGGAGCAACACCCAAT | ||||
CV793598 | PR2B | β-1,3-Glucanase—hydrolysis of flavonoid and isoflavonoid compounds | F-GCCTAGAAAGGCAAATCCTTC | 37 |
R-CATCTGCCGTGGGAATAAGA | ||||
DY475248 | PAMP | Transcription of defense-related genes—resistance response via metabolism utilizing polyamines and nicotianamines | F-CCGCTGATACAGTGGAGGTT | 38 |
R-GTTTCCCCAATTTCCTCACC | ||||
TF1070.m00005 | TF1063 | Host defense gene (QTLAR1–LG4) | F-GTTATGTGGGTGGAGTTGGAA | 39 |
R-CAACCATAGCTGCAACCATCT | ||||
TC101530 | TF1082 | Host defense gene (QTLAR2–LG4) | F-AAGTCTTATCGTGGCGTTCG | 38 |
R-TCATAAGCTAGTGCTGCTGCT | ||||
PAL | Induced phenyl propanoid pathway | F-AAGCTCACTTGCAGAGACAT
R-ACCTGATGCAGTGATTGTGC |
40 |