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[Preprint]. 2023 Apr 4:2023.04.03.23288056. [Version 1] doi: 10.1101/2023.04.03.23288056

Table 1.

Genome-wide significant loci for the discovery GWAS of RTV in 404,302 individuals

Genomic Risk Locus Lead Variant Chr Position A1/A2 Discovery GWAS Replication GWAS
A1 Freq Beta P-value Top Assigned Gene Nearest Gene Beta P-value
1 rs183204237 2 162188514 C/G 9.790⍰×⍰10−4 −0.21 2.340⍰×⍰10−8 PSMD14 PSMD14 −0.088 0.46
2 rs35206686 4 152762934 T/TC 0.736 −0.015 6.090⍰×⍰10−9 FHIP1A RP11-424M21 −0.004 0.615
3 rs17167210 7 133339343 A/G 0.435 0.013 1.5⍰×⍰10−9 EXOC4 EXOC4 −0.01 0.141
4 rs35859241 15 51736660 G/A 0.254 −0.014 3.69⍰×⍰10−8 SCG3 RP11-707P17.1 −0.001 0.864
5 rs912243472 15 74096786 G/GA 0.135 0.018 1.97⍰×⍰10−8 TBC1D21 INSYN1 0.005 0.575
6 rs1863115 17 44625928 A/C 0.74 0.017 2.47x10−10 LRRC37A2 LRRC37A2 0.003 0.755
7 rs11697176 20 3831629 T/C 0.112 −0.021 1.9⍰×⍰10−8 PANK2 MAVS 0.008 0.58