Table 1.
Genomic Risk Locus | Lead Variant | Chr | Position | A1/A2 | Discovery GWAS | Replication GWAS | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
A1 Freq | Beta | P-value | Top Assigned Gene | Nearest Gene | Beta | P-value | |||||
1 | rs183204237 | 2 | 162188514 | C/G | 9.790⍰×⍰10−4 | −0.21 | 2.340⍰×⍰10−8 | PSMD14 | PSMD14 | −0.088 | 0.46 |
2 | rs35206686 | 4 | 152762934 | T/TC | 0.736 | −0.015 | 6.090⍰×⍰10−9 | FHIP1A | RP11-424M21 | −0.004 | 0.615 |
3 | rs17167210 | 7 | 133339343 | A/G | 0.435 | 0.013 | 1.5⍰×⍰10−9 | EXOC4 | EXOC4 | −0.01 | 0.141 |
4 | rs35859241 | 15 | 51736660 | G/A | 0.254 | −0.014 | 3.69⍰×⍰10−8 | SCG3 | RP11-707P17.1 | −0.001 | 0.864 |
5 | rs912243472 | 15 | 74096786 | G/GA | 0.135 | 0.018 | 1.97⍰×⍰10−8 | TBC1D21 | INSYN1 | 0.005 | 0.575 |
6 | rs1863115 | 17 | 44625928 | A/C | 0.74 | 0.017 | 2.47x10−10 | LRRC37A2 | LRRC37A2 | 0.003 | 0.755 |
7 | rs11697176 | 20 | 3831629 | T/C | 0.112 | −0.021 | 1.9⍰×⍰10−8 | PANK2 | MAVS | 0.008 | 0.58 |