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Binding mode of 3d with MERS-CoV 3CLpro. A) Fo-Fc Polder omit map (green mesh) contoured at 3σ. B) Hydrogen bond interactions. C) Surface representation showing the orientation of 3d in the MERS-CoV 3CLpro binding pocket. Neighboring residues are colored yellow (nonpolar), cyan (polar), and white (weakly polar). PDB IDs: 3d (8E6B).
