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. 2023 Apr 17;24:74. doi: 10.1186/s13059-023-02914-z

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© The Author(s) 2023

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 2 — The Linear Genome View is the core view of JBrowse, allowing flexible and interactive examination of a genome sequence and its annotations. The user interface elements annotated on this diagram include (A) view menu, (B) view name, (C) close view button, (D) reference sequence name, (E) reference sequence overview with optional ideogram, (F) open track selector button, (G) pan buttons, (H) location and search box, (I) view size, (J) zoom buttons and slider, (K) major ruler coordinates, (L) track label, (M) track drag handle, (N) track close button, (O) track name, (P) track menu button, (Q) track menu, (R) track resize handle, (S) track selector menu button, (T) connection menu button, (U) track selector filter, (V) track configuration menu button, (W) collapsible category label, (X) track select box, and (Y) add track/connection button