Table 1.
Resistance mechanismsc | MIC (mg/L) and susceptibility categoryf | |||||||
---|---|---|---|---|---|---|---|---|
Strain | Source | Serotypea | STb | β-Lactams | Quinolones | Ampicillin | Ampicillin/sulbactam | Ciprofloxacin |
Hi-022 | Sputum from patient with COPD | Non-typeable | ST836 | TEM-1 β-lactamase Group III(+) high-rPBP3d |
None | >16 (R) | 8 (R) | ≤0.06 (S) |
Hi-072 | Sputum from patient with COPD | Non-typeable | ST1 | Group III(+) high-rPBP3d | Altered GyrA and ParCe | 2 (R) | 2 (R) | 1 (R) |
Using hicap v.1.0.3 (https://github.com/scwatts/hicap).
Transferable genes were detected using ResFinder v.4.1 (https://cge.food.dtu.dk/services/ResFinder); alterations in chromosomal genes were detected by multiple sequence alignment of translated genes, with H. influenzae Rd KW20 (GCA_000027305) as reference.
Characterized by the S385T, L389F and N526K substitutions in the transpeptidase region of PBP3.6
Substitutions in the QRDRs of GyrA (S84L) and ParC (S84I) present.31
MICs were determined by broth microdilution according to recommendations from EUCAST (https://www.eucast.org/ast_of_bacteria), using custom MIC panels (Sensititre NONAG7, Thermo Fisher Scientific), and interpreted (S, susceptible; R, resistant) according to the most recent version of the EUCAST breakpoint table (version 13.0).