TABLE 1.
Cell | Cistrome | logPval | NumberCistromeGenes | Threshold | MostSignificant |
---|---|---|---|---|---|
RC43N | RC43N.VDR.ATAC | 11.35 | 1,358 | Significant | PIK3R6 |
RC43T | RC43T.VDR.ATAC | 3.01 | 349 | Significant | PIK3C2G |
RC43T | RC43T.VDR.ChIP | 1.40 | 28 | Significant | FRG2B |
HPr1AR | HPr1AR.VDR.ATAC | 0.82 | 73 | NS | KCNH6 |
LNCaP | LNCaP.VDR.ATAC | 0.40 | 80 | NS | ANGPTL7 |
RC43N | RC43N.VDR.ChIP | 0.28 | 14 | NS | ANKRD26P1 |
LNCaP | LNCaP.VDR.ChIP | 0.26 | 51 | NS | POTEM |
NOTE: Genes were annotated to ATAC-seq or ChIP-seq regions within 100 kb and those genes overlapped with the DEGs in the same cell background with elevated BAZ1A expression, and enrichment tested with a hypergeometric test (lower.tail = FALSE).