Table 1.
The basic genomic characteristics of 21 Corydalis plastomes.
| S. | Species | Genome (bp) | Unique genes | Total genes | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| No. | name | Total | LSC | IR | SSC | GC (%) | coding (cd) | tRNA (t) | rRNA (r) | Total | Gene Lost/Pseudogene | Duplicated (cd+t+r) | Total |
| 1 | Corydalis platycarpa | 192,020 | 96,492 | 42,640 | 10,247 | 40.4 | 78 | 30 | 04 | 112 | 01 | 26 (14 + 8+4) | 138 |
| 2 | Corydalis adunca | 196,128 | 92,145 | 47,226 | 9,531 | 41.0 | 71 | 30 | 04 | 105 | 08 | 22 (10 + 8+4) | 127 |
| 3 | Corydalis conspersa | 187,810 | 92,280 | 47,375 | 780 | 40.8 | 67 | 30 | 04 | 101 | 12 | 25 (13 + 8+4) | 126 |
| 4 | Corydalis davidii | 165,416 | 85,352 | 39,867 | 330 | 40.7 | 67 | 30 | 04 | 101 | 12 | 21 (9 + 8+4) | 122 |
| 5 | Corydalis edulis | 154,395 | 81,999 | 26,250 | 19,504 | 40.2 | 77 | 29 | 04 | 110 | 03 | 18 (5 + 7+4) | 128 |
| 6 | Corydalis fangshanensis | 192,554 | 98,393 | 42,263 | 9,635 | 40.3 | 78 | 30 | 04 | 112 | 01 | 26 (14 + 8+4) | 138 |
| 7 | Corydalis filistipes | 169,237 | 97,016 | 28,741 | 14,640 | 41.2 | 77 | 30 | 04 | 111 | 02 | 17 (6 + 7+4) | 128 |
| 8 | Corydalis hsiaowutaishanensis | 188,784 | 88,558 | 44,070 | 12,086 | 40.8 | 77 | 30 | 04 | 111 | 02 | 25 (13 + 8+4) | 136 |
| 9 | Corydalis impatiens | 197,317 | 89,790 | 52,211 | 3,105 | 40.7 | 69 | 30 | 04 | 103 | 10 | 23 (11 + 8+4) | 126 |
| 10 | Corydalis inopinata | 181,335 | 91,727 | 44,053 | 1,502 | 40.9 | 68 | 29 | 04 | 101 | 12 | 21 (9 + 8+4) | 122 |
| 11 | Corydalis lupinoides | 178,650 | 85,220 | 46,377 | 1,506 | 40.8 | 67 | 29 | 04 | 100 | 13 | 19 (7 + 8+4) | 119 |
| 12 | Corydalis maculata | 165,066 | 86,472 | 28,918 | 20,758 | 41.0 | 77 | 30 | 04 | 111 | 02 | 17 (5 + 8+4) | 128 |
| 13 | Corydalis mucronifera | 176,217 | 85,579 | 44,778 | 1,082 | 40.2 | 72 | 30 | 04 | 106 | 07 | 26 (14 + 8+4) | 132 |
| 14 | Corydalis namdoensis | 169,818 | 96,301 | 29,733 | 14,051 | 41.1 | 77 | 30 | 04 | 111 | 02 | 17 (6 + 7+4) | 128 |
| 15 | Corydalis pauciovulata | 161,773 | 93,238 | 22,719 | 23,097 | 41.5 | 66 | 29 | 04 | 99 | 14 | 16 (5 + 7+4) | 115 |
| 16 | Corydalis saxicola | 188,060 | 94,289 | 41,969 | 9,833 | 40.2 | 78 | 30 | 04 | 112 | 01 | 26 (14 + 8+4) | 138 |
| 17 | Corydalis shensiana | 155,935 | 82,369 | 26,344 | 20,495 | 40.6 | 78 | 29 | 04 | 111 | 02 | 15 (4 + 7+4) | 126 |
| 18 | Corydalis ternata | 170,483 | 88,722 | 29,514 | 22,733 | 41.2 | 75 | 30 | 04 | 109 | 04 | 17 (6 + 7+4) | 126 |
| 19 | Corydalis tomentella | 190,198 | 96,701 | 41,955 | 9,636 | 40.3 | 77 | 29 | 04 | 110 | 03 | 26 (14 + 8+4) | 136 |
| 20 | Corydalis trisecta | 164,354 | 91,046 | 28,345 | 16,618 | 41.5 | 75 | 29 | 04 | 108 | 05 | 17 (6 + 7+4) | 125 |
| 21 | Corydalis turschanivoii | 161,534 | 89,414 | 29,143 | 13,834 | 40.9 | 77 | 30 | 04 | 111 | 02 | 17 (6 + 7+4) | 128 |
Bold represents the species used in the present study.