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. 2023 Apr 6;14:1130891. doi: 10.3389/fmicb.2023.1130891

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Copyright © 2023 De Sousa Violante, Michel, Romero, Bonifait, Baugé, Perrin-Guyomard, Feurer, Radomski, Mallet, Mistou and Cadel-Six.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic reconstruction based on core-genome single nucleotide polymorphism substitutions of the 304 Salmonella Mbandaka strains isolated in France between 2016 and 2021 from the bovine and poultry sectors. The maximum likelihood criterion and the transversional model TVM + F model were applied. Salmonella Mbandaka SA20026234 was used as the reference complete genome. The source of the strains (bovine and poultry) is indicated in the ring around the tree. The 12 genomic groups identified with their intergenomic mean SNP values are indicated by different names and colors for a better visualization.