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. 2023 Apr 8;40(4):msad081. doi: 10.1093/molbev/msad081

Fig. 6.

Fig. 6.

Purifying selection conserved hydrophobicity and U content at the second codon position after losing mRNA editing in COX3. (A) Cumulative hydrophobicity index based on the Kyte–Doolittle index of hydrophobicity. Black, T. brucei; solid orange, L. tarentolae; dotted orange, Leptomonas pyrrhocoris; dotted green, C. fasciculata; solid blue, A. deanei. (B–D) U walk for different codon positions. (E) dN − dS value for each codon position. Values higher than 10 or lower than −10 were cut at such values. Red bars, P < 0.05 according to FEL method; blue bars, nonsignificant sites. Values below 0 and with P < 0.05 indicate sites under purifying selection.