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. 2023 Apr 21;18(4):e0284721. doi: 10.1371/journal.pone.0284721

Role of multi-layer tissue composition of musculoskeletal extremities for prediction of in vivo surface indentation response and layer deformations

Erica E Neumann 1,2, Sean Doherty 1,2, James Bena 3, Ahmet Erdemir 1,2,*
Editor: Yaodong Gu4
PMCID: PMC10121013  PMID: 37083580

Abstract

Emergent mechanics of musculoskeletal extremities (surface indentation stiffness and tissue deformation characteristics) depend on the underlying composition and mechanics of each soft tissue layer (i.e. skin, fat, and muscle). Limited experimental studies have been performed to explore the layer specific relationships that contribute to the surface indentation response. The goal of this study was to examine through statistical modeling how the soft tissue architecture contributed to the aggregate mechanical surface response across 8 different sites of the upper and lower extremities. A publicly available dataset was used to examine the relationship of soft tissue thickness (fat and muscle) to bulk tissue surface compliance. Models required only initial tissue layer thicknesses, making them usable in the future with only a static ultrasound image. Two physics inspired models (series of linear springs), which allowed reduced statistical representations (combined locations and location specific), were explored to determine the best predictability of surface compliance and later individual layer deformations. When considering the predictability of the experimental surface compliance, the physics inspired combined locations model showed an improvement over the location specific model (percent difference of 25.4 +/- 27.9% and 29.7 +/- 31.8% for the combined locations and location specific models, respectively). While the statistical models presented in this study show that tissue compliance relies on the individual layer thicknesses, it is clear that there are other variables that need to be accounted for to improve the model. In addition, the individual layer deformations of fat and muscle tissues can be predicted reasonably well with the physics inspired models, however additional parameters may improve the robustness of the model outcomes, specifically in regard to capturing subject specificity.

Introduction

Studies of musculoskeletal extremity region tissue remains important, as injury to these regions is common and the tissue layers interface with prosthetics and exo-skeleton devices [13]. Upper and lower limbs are the two most frequently injured regions during car crashes [4]. The extremities were also more frequently wounded than other regions during recent military combat, as the extremities are difficult to protect without reduction to mobility [5]. Understanding how soft tissue behaves under loading can provide a valuable insight into several areas of biomedical research. Mechanics of musculoskeletal soft tissue layers, e.g., indentation response both at the surface and in internal tissue structures, may be utilized to identify device-tissue interactions to improve device design [6], detect soft tissue damage [7], or build accurate haptic feedback surgical simulations [8]. Improving on surgical simulations by enhancing patient realism can reduce patient exposure to inexperienced medical practitioners, as novice surgeons can gain experience in a virtual setting [9].

The bulk soft tissue surface response is dependent on the underlying tissue properties, geometry, and interactions within the composite layers of skin, fat, and muscle. Indentation response inherits viscoelastic and nonlinear behavior of underlying tissues, which are typically modeled with elaborate constitutive relationships at the material level, e.g. hyperelastic. However, this work focuses on linearized response, which still accommodates to account for major contributions of tissue layers to said response. This linear approximation has been made previously in literature for generation of simple but useful and relevant mechanical behavior estimation [10]. Additionally, this simplicity lends itself to an easier to compare and understand metric of relative indentation mechanics. The literature has reported differences of indentation response across various locations of the body [1113], however the identification of what contributes to these differences is rarely explored in detail. Understanding of what contributes to the difference in mechanics can provide a method for modeling mechanical behavior as a function of tissue composition, which can enable future predictions of indentation response.

While individual layer composition and/or mechanics likely explain the bulk surface indentation response of soft tissue, there are limited experimental studies that investigate the mechanistic relationships of the underlying tissue layers and their respective interactions. Much of the literature examines each layer (skin, fat, or muscle) individually [1416], in a targeted manner, or as a bulk tissue where all the layers are combined and treated as one [11,17,18], which in turn eliminates the mechanical interaction between layers that may explain the resulting mechanical behavior on a layer specific level.

The composition of layers that make up the soft tissue may lead to a different response to external forces, which has been shown for several biological tissues, including arterial and skin tissues [1921]. Other studies have utilized finite element analysis to examine the indentation response of individual soft tissue layers [22,23], however they require applying appropriate material models and can be computationally expensive. Identifying the appropriate material model coefficients is a challenge, and can fail to capture the inherent variability between different patients. Inverse finite element analysis offers the ability to extract patient-specific response data, but requires mechanical testing, which may not be feasible in clinical or field applications, and optimization, which leads to even more simulation iterations and time [18]. Given these drawbacks, linear statistical modeling becomes a useful tool to analyze and predict how musculoskeletal soft tissue responds to loading.

The goal of this study is to determine how individual soft tissue layer architecture affects the mechanical behavior of multi-layer tissue regions across different sites within human in-vivo extremities. Two hypotheses were investigated through statistical modeling to meet this goal: 1) in vivo indentation stiffness, an aggregate mechanical behavior of multi-layer tissue regions, is related to the thickness of skin, fat, and muscle comprising the layered tissue architecture and 2) individual tissue layer (fat and muscle) mechanical behavior can be explained using only the aggregate surface mechanical response and a quantification of structure, in this case unloaded fat and muscle layer thicknesses. These model features can easily be annotated and extracted from a single ultrasound image, making the model usable without knowledge of indentation force-displacement response for new data.

Methods

Dataset overview

A publicly available dataset was used for the analysis performed in this paper [24]. Briefly, indentation data was collected using an instrumented ultrasound device [25], where manual indentation was performed on 100 subjects. Informed written consent was obtained from research subjects. Data collection methods were approved by the Cleveland Clinic institutional review board under IRB # 14–1597. De-identified dissemination of data did not fall under human subjects research under Stanford University IRB # 34361.

Three important factors were used for determining indentation location: arm vs. leg, above vs. below the hinge joint, and anterior vs. posterior for the region. Eight locations then result from these criteria: the upper and lower right arms and legs in the anterior and posterior central regions. The central region was chosen for each of these areas for consistency, but also as a way to avoid indentation very close to bone which may influence mechanical behavior. The instrumented ultrasound device provided the force-displacement response over the course of an indentation trial.

Complete data were available from 95 subjects (47 male, 48 female), while data from the 5 remaining test subjects were excluded due to errors in force data collection. The force-displacement curve provided a model response variable, and ultrasound images were processed for model inputs. Ultrasound image analysis was performed by manually selecting tissue boundaries (superficial skin, skin/fat interface, fat/muscle interface, and muscle/bone interface) throughout the manual indentation procedure. The skin layer was not used in the model due to the limited resolution of the ultrasound images. Previous work analyzed how tissue response was predicted by indentation region or other demographic factors [26]. Similar to this prior work, the aggregate tissue mechanical behavior was characterized using a linear fit to the pressure vs. probe displacement data extracted during manual indentation. Pressure is defined as the force magnitude divided by the ultrasound probe contact area and displacement corresponds to the bulk tissue thickness change (measured from the superficial skin boundary to the bone boundary). Force channels were reset to zero at zero displacement and used to calculate force magnitude.

The linear fit was performed using numpy.linalg.lstsq in Python version 2.7 (http://www.python.org), where the slope of the line is equivalent to the tissue surface stiffness (note that the y-intercept was set to zero). In following, tissue compliance was calculated as the inverse of tissue surface stiffness would be tissue compliance, which is the metric of interest for this work facilitating development of physics inspired statistical representation of the data (see below). Fig 1 provides a visualization of the relationship between the experimental compliance and the tissue layer thicknesses. It can be observed that there is some clustering of location by muscle thickness. Compliance and tissue thickness appear weakly correlated for all regions of the musculoskeletal extremities, creating a need for adding musculoskeletal region as an input feature.

Fig 1.

Fig 1

Experimental compliance vs. tissue thickness (fat–left, muscle–right). Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior.

Statistical tests

A linear mixed effect analysis was performed in R version 3.6.2 [27] using the ‘lme4’ and lmerTest’ packages [28,29] to examine the relationship of muscle and fat tissue thickness on the aggregate tissue compliance. The subject ID and location were defined as random effects, while the fixed effects were initial muscle thickness and initial fat thickness. Random effects are grouping effects within which observations are expected to be correlated, while fixed effects can be thought as factors that will have a predictable effect across the population, and are the primary focus of the analysis [30]. Compliance was used as the response variable. Additionally, a linear model, using the ‘stats’ package [27], was used to examine the location specific relationship of muscle and fat layer thicknesses on the aggregate tissue compliance. The significance level was set to 0.05 for all model coefficients.

Physics inspired statistical models

The physics inspired models (combined locations vs location specific) were constructed to have physical intuition. In this model, coefficients can be expressed as physically meaningful material parameters of the different tissue layers. A common physics representation of deformation is a mass-spring system, where springs resist the force applied on a mass. This work proposes that muscle and fat tissue layers can be modeled as two serial springs given the stacking of tissue layers on top of each other. These springs are attached to a rigid interface (bone) that does not move, and experience force from the movement of an ultrasound probe. Linear springs in a serial arrangement can be approximated as a single Hookean spring where the aggregate tissue spring constant (k) is a function of the muscle (km) and fat (kf) spring constants (Eq 1).

1k=1km+1kf (1)

Eq 1 is now rewritten based on substituting Hooke’s Law into the definition of Young’s Modulus, so that the layer spring constants are a function of the material modulus (E), indenter area (A), and initial thickness of the tissue (t) (Eq 2).

km=EmAmtm,kf=EfAftf (2)

Substituting both of the functions from Eq 2 into Eq 1, Eq 1 can then be written as:

1k=tmEmAm+tfEfAf (3)

Assuming that the indenter area is constant across the depth of the tissue (A = Am = Af), further simplifies Eq 3 to:

Ak=tmEm+tfEf (4)

The model response variable, (A/k) is the aggregate compliance in units of mm3/N. The fixed effects include the thickness of muscle (tm) and fat (tf), respectively in mm. The random effects used when all locations are combined were location and subject ID, however location specific models were also developed for the physics-based method. The resulting coefficients of the linear model represent the inverse modulus (1/MPa) of the muscle (1/Em) and fat (1/Ef) layers, respectively. This spring based formulation has value in providing easier to compare metrics, while also allowing for understandable differences in the coefficients for muscle and fat. The coefficients could be useful in predicting smaller deformations, as with larger deformations the hyperbolic nature of tissue stiffness will cause these models to under predict aggregate stiffness. Given this, the statistical representation did not include an intercept (i.e. the model is forced through the (x, y) point of (0, 0)). This is an important feature for the physics inspired model, as the slope of this fit is proportional to the inverse of Young’s modulus, a measure of material response. Given this, it is important for the model to intersect (0, 0) since with zero stress there should be zero strain. These model coefficients be utilized to predict layer response for a given loading as described below.

Tissue deformations: Physics inspired model vs experimental

Utilizing the physically meaningful parameters extracted from the physics inspired models, model results were compared to the experimental results for each tissue layer. The model coefficients, 1/Em and 1/Ef, were used to calculate the deformation of the muscle and fat layers (Eq 5).

Δtm,pred=tmEm*FmaxA,Δtf,pred=tfEf*FmaxA (5)

The predicted displacements, Δtm,pred and Δtf,pred, are functions of layer thickness (tm or tf), maximum applied indentation force (Fmax), and indenter area (A). Predicted displacements were compared to the experimental displacements of the muscle and fat layers using the location specific and combined location model coefficients (1/Em and 1/Ef).

Conventional statistical models with intercepts for sensitivity analysis

Conventional linear statistical models were also developed, where the model intercept was included in representation. While the coefficients of this model may not have a directly interpretable relationship to layer mechanical properties (as elaborated upon above), they still provide valuable intuition. The coefficients of the intercept model can be used to consider the effect a unit change in thickness will have on tissue compliance over the range of data that was collected. The formulation is otherwise identical to the statistical tests methods used above, where a linear mixed effect model was formulated with random effects set to location and subject ID when all locations are combined. Location specific models were also generated. These two models were developed to examine the sensitivity of the physics inspired models to having the intercept removed.

Results

The physics inspired model coefficients varied across locations and showed significance for all 8 indentation locations for both the fat and muscle coefficients (Table 1). The absolute percent difference between the predicted compliance and experimental compliance was 29.7 +/- 31.8% and 25.4 +/- 27.9% for the location specific and combined location physics-based models, respectively. Fig 2 shows correlation plots for the experimental vs. predicted compliance of both the location specific and combined physics-based models.

Table 1. Physics inspired model coefficients (mm3/N) for each location.

LA_A LA_P LL_A LL_P UA_A UA_P UL_A UL_P Combined
Muscle 13.36***
(2.02)
8.49***
(1.66)
6.87***
(0.61)
10.49***
(1.06)
17.03***
(1.36)
18.75***
(1.90)
18.85***
(1.88)
14.67***
(1.03)
3.77**
(1.14)
Fat 26.94***
(4.10)
44.96***
(8.00)
12.29**
(3.98)
27.82***
(5.39)
27.21***
(5.95)
38.13***
(4.42)
17.52***
(4.766)
23.31***
(4.39)
18.10***
(2.03)

Standard errors are reported in parentheses below the coefficient estimate. Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior. Asterisks represent statistical significance, where ***<0.001, **<0.01, *<0.05.

Fig 2. Physics inspired model: Experimental compliance vs. predicted compliance (black dashed line equation: y = x).

Fig 2

The left plot shows results using location specific coefficients and the right plot shows results using coefficients from all locations combined. Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior.

The conventional model (with intercept) coefficients varied across locations and showed significance in 2 locations for the muscle coefficient and 5 locations for the fat coefficient (Table 2). The coefficients for the combined locations were all significant. The absolute percent difference between the predicted compliance and experimental compliance was 26.8 +/- 29.8% and 25.4 +/- 28.0% for the location specific and combined location intercept models, respectively. Fig 3 shows correlation plots for the experimental vs. predicted compliance of both the location specific and combined models.

Table 2. Coefficients of conventional statistical models (with intercept) for location specific and combined location models.

LA_A LA_P LL_A LL_P UA_A UA_P UL_A UL_P Combined
Intercept 288.3***
(45.7)
365.5***
(47.0)
338.3***
(51.8)
803.3***
(158.7)
428.3***
(101.9)
415.9**
(155.5)
324.0*
(134.6)
1032.4***
(197.5)
395.4***
(88.6)
Muscle -1.24
(2.87)
-7.64**
(2.44)
-0.49
(1.24)
-3.16
(2.86)
3.55
(3.44)
8.47
(4.26)
10.06*
(4.09)
-2.01
(3.31)
3.30**
(1.16)
Fat 10.61*
(4.30)
7.79
(7.85)
-1.79
(3.95)
9.46
(6.00)
15.51*
(6.15)
27.93***
(5.73)
12.98*
(5.02)
11.95**
(4.43)
17.71***
(2.04)

Standard errors are reported in parentheses below the coefficient estimate. Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior. Asterisks represent statistical significance, where ***<0.001, **<0.01, *<0.05.

Fig 3. Conventional statistics model: Experimental compliance vs. predicted compliance (black dashed line equation: y = x).

Fig 3

The left plot shows results using location specific coefficients and the right plot shows results using coefficients from all locations combined. Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior.

A comparison of experimental to predicted fat displacement is provided for the four different model coefficients to evaluate the second hypothesis of this work. Predicted fat displacement was calculated using the physics inspired, location specific model coefficients (Fig 4) and combined location model coefficients (Fig 5).

Fig 4. Physics inspired model displacement vs. experimental displacement for fat tissue at each indentation location using coefficients from each individual location (black dashed line equation: y = x).

Fig 4

Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior.

Fig 5. Physics inspired model displacement vs. experimental displacement for fat tissue at each indentation location using coefficients from all locations combined (black dashed line equation: y = x).

Fig 5

Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior.

Similarly, experimental muscle displacement comparison to predicted muscle displacement are shown for the physics inspired, location specific model coefficients (Fig 6) and combined location model coefficients (Fig 7).

Fig 6. Physics inspired model displacement vs. experimental displacement for muscle tissue at each indentation location using coefficients from each individual location (black dashed line equation: y = x).

Fig 6

Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior.

Fig 7. Physics inspired model displacement vs. experimental displacement for muscle tissue at each indentation location using coefficients from all locations combined (black dashed line equation: y = x).

Fig 7

Abbreviations: LA_A–lower arm anterior, LA_P–lower arm posterior, LL_A–lower leg anterior, LL_P–lower leg posterior, UA_A–upper arm anterior, UA_P–upper arm posterior, UL_A–upper leg anterior, UL_P–upper leg posterior.

Discussion

The initial exploration of the data (Fig 1) highlights the region specific and individualized nature of tissue stiffness. Experimental compliance and tissue thickness show a weak positive correlation for both fat and muscle. This figure also highlights how the distribution of muscle thickness is noticeably clustered by location, which is expected given that the lower extremities account for a larger percentage of muscle mass relative to the upper extremities [31]. This relationship holds for skeletal muscle partial volume as well [31]. It can be seen in both Tables 1 and 2 in the combined region column that the fat modulus was close to 5 times more compliant than the muscle’s modulus. These coefficients appear to do a reasonable job at estimating tissue aggregate compliance, with mean error slightly lower than 30%. Using fat and muscle thickness as the only fixed effects in a model to predict tissue response could be valuable based on how accurate of mechanical response is needed. For instance, a diabetic foot showed nearly a 100% change in Young’s Modulus compared to a healthy control [32]. This suggests that 30% error may be sufficient for other pathologies but this is likely highly disease specific. Other factors can also not be accounted for in this model, as Zheng and Mak saw a 460% change in effective modulus based on patient posture change, while the thickness only changed 10% in the lower leg region [13]. A linear model would fail to capture this dramatic increase in modulus since the thickness change was quite small. In relation to the first hypothesis (that layer thickness is predictive of mechanics), fat and muscle thicknesses provide a rough approximation of tissue response in a resting position, but more complicated scenarios or higher accuracy may need different model formulation.

Improved fit to the experimental compliance data was shown when combining all the locations (Figs 2 & 3), in comparison to fitting locations separately (4.3% improvement in mean percent difference for the physics model, 1.4% improvement in mean percent difference for the intercept based model). This suggest that subject variability is an important factor in modeling of aggregate stiffness, with an improvement of 4.3% in mean percent difference when subject effects are considered, as subject effects are not a factor in the location specific models given that each patient only has one measurement for each location of indentation. While the intercept coefficient was significant in the intercept combined location model, the fat and muscle coefficients were similar to the physics based combined location model. A percent difference of 13.29% was observed for the muscle coefficient and a percent difference of 2.17% between the fat coefficients. This suggests that the intercept coefficient for the combined model is small enough to not contribute appreciably to the prediction of aggregate tissue compliance.

The layer specific mechanics predictions using the location specific physics model compared well to the experimental layer deformation of muscle (UA_P, UL_P, UL_A) in some cases but poorly in others (Fig 6). Additionally, when looking at the comparison of the predicted deformation to the experimental deformation for the all locations combined physics model (Fig 7), the muscle deformation is significantly under-predicted. Fat tends to be over predicted for the combined locations model (Fig 4), suggesting the under prediction of muscle deformation is compensated by an over prediction for fat deformation. The location specific coefficients were larger in magnitude (Table 2), resulting in better correlations with the experimental deformation (Fig 6). However, when comparing the experimental fat layer deformations, the combined location physics model exhibited better predictability (Fig 5). There appears to be more clustering of the muscle thickness based on location, whereas fat thickness is more distributed within various locations. Since the intercept was forced to zero for the physics based model, the clustering of the muscle likely leads to the improved fit of the location specific model when examining muscle specific mechanics.

A main limitation of this study is the inability for the ultrasound to capture the indentation response of the skin layer, due to poor resolution in comparison to the small skin thickness. The skin layer was therefore ignored from the statistical models. A previous FE study showed that variations in the skin modulus contributed most to the forearm mechanical response [33], however since only very small, if any, displacement was recorded for the skin layer, this dataset is unable to distinguish the skin layer contribution to the surface indentation response. It was also observed that skin thickness is similar across the 8 indentation sites (< 1 mm range of mean thickness), further suggesting that skin thickness may not be contributing to the variation in mechanical surface response of the soft tissue. Higher resolution ultrasound images may be necessary for future work to include skin parameters within models. In addition, the statistical models that were used in this study were not designed to include patient specific or location specific material properties, i.e. assumed fat and muscle mechanical properties will be similar among participants. Finally, the experimental indentation response was assumed to be linear. Previous work showed that this was an appropriate assumption for most cases [26], however, future studies may benefit from quantifying the non-linear behavior of the surface indentation response. This would allow these models to be more accurate in predicting large deformations.

Conclusion

This study revealed several important considerations when predicting the mechanical behavior of layered tissue structures using statistical models. Our first hypothesis was supported by statistical significance of coefficients for both fat and muscle in combined location models and for location-specific models of the physics inspired representation. The statistical models presented in this work allow for a rough estimate of the fat and muscle displacement based on the initial thickness of each respective tissue. However, depending on the tissue of interest (fat vs muscle) or the biomechanical marker (tissue deformation vs indentation compliance) one may want to utilize different types of physics inspired models (location specific or combined location). Our results indicate that tissue thickness affects emergent mechanical behavior of musculoskeletal tissue layers. However, it is also clear that the thickness alone is not enough to fully describe the aggregate surface compliance and accurately predict individual layer deformations. Direct measurement of mechanics can assist development and calibration of individualized finite element representations of musculoskeletal extremities. Without such measurements statistical models (as derived in this study) provide the means to achieve individualized predictions. Nonetheless, more comprehensive statistical models or data-driven approaches such as machine learning may yield improved accuracy. Future work should consider additional variables, such as demographics, related to patient specific response.

Data Availability

Raw data is available at https://multisbeta.stanford.edu/ (doi.org/10.18735/S5R97F). Aggregated data for this study can be found at the Downloads section of the project website (https://simtk.org/projects/multis) or directly at https://simtk.org/frs/?group_id=1032.

Funding Statement

This study has been supported by United States Army Medical Research and Material Command, Department of Defense (W81XWH-15-1-0232, PI: Erdemir). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. The views, opinions and/or findings contained in this document are those of the authors and do not necessarily reflect the views of the funding agency.

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Decision Letter 0

Yaodong Gu

19 Oct 2022

PONE-D-22-21815Role of multi-layer tissue composition of musculoskeletal extremities for prediction of in vivo surface indentation response and layer deformationsPLOS ONE

Dear Dr. Erdemir,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Dec 03 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

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If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Yaodong Gu

Academic Editor

PLOS ONE

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

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2. Please amend your current ethics statement to address the following concerns:

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b) If consent was verbal, please explain i) why written consent was not obtained, ii) how you documented participant consent, and iii) whether the ethics committees/IRB approved this consent procedure.

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"This study has been supported by USAMRMC, DoD (W81XWH-15-1-0232, PI: Erdemir)"

We note that you have provided funding information that is not currently declared in your Funding Statement. However, funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. 

Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: 

"This study has been supported by United States Army Medical Research and Material Command, Department of Defense (W81XWH-15-1-0232, PI: Erdemir). The views, opinions and/or findings contained in this document are those of the authors and do not necessarily reflect the views of the funding agency. "

Please include your amended statements within your cover letter; we will change the online submission form on your behalf.

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5. Please ensure that you refer to Figures 6 and 7 in your text as, if accepted, production will need this reference to link the reader to the figure.

6. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

Additional Editor Comments:

Just check the minor questions raised by reviewer 2

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: No

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #2: Review comment

This manuscript entitled “Role of multi-layer tissue composition of musculoskeletal extremities for prediction of in vivo surface indentation response and layer deformations” primarily aimed to determine how individual soft tissue layer architecture affects the mechanical behavior of multi-layer tissue regions across different sites within human in-vivo extremities. The authors bring an interesting study, but there are still some problems that cannot up this study to a publishing level. Some suggestions are listed in the specific comments below.

Specific comments:

The current introduction section provides limited background information, please further highlight the research necessity and potential value. Why is it important to determine the effects of individual soft tissue layer architecture on the mechanical behavior of multi-layer tissue regions across different sites within human in-vivo extremities.

What was the basis for selecting the eight sites of the upper and lower extremities?

The methodology involving technical subjects (especially physics inspired statistical models) is difficult to understand, please provide more details to make it clearer.

‘…that the upper leg region is very likely to have a thicker layer of muscle than the lower arm region for most individuals.’, please add a ref here.

In summary, please ensure that your manuscript is prepared correctly (without any grammatical and spelling mistakes) and formatted before submitting a revision.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2023 Apr 21;18(4):e0284721. doi: 10.1371/journal.pone.0284721.r002

Author response to Decision Letter 0


21 Nov 2022

Response to the Reviewer:

We thank the reviewer for their valuable feedback. Responses to the comments have been included below, with reference line numbers in the marked up manuscript.

Reviewer Specific Comments to the Corresponding Author:

1. The current introduction section provides limited background information, please further highlight the research necessity and potential value. Why is it important to determine the effects of individual soft tissue layer architecture on the mechanical behavior of multi-layer tissue regions across different sites within human in-vivo extremities.

Author Response:

The introduction section was expanded with some of the research that justifies the statistical modeling effort. Several additional citations and research avenues were added in lines 44-49. Surgical simulation represents one of the most intriguing areas (lines 52-54). Justification on why statistical models were used over traditional physics simulations like finite element analysis was also added to the introduction.

2. What was the basis for selecting the eight sites of the upper and lower extremities?

Author Response:

The paper was revised to justify why the 8 different locations were selected in lines 95-101. While anatomical measurements were performed in reference 20 at 48 different locations to obtain tissue thicknesses across the musculoskeletal extremities, the central region of each extremity was chosen given its distance from the bone. Proximity to an extremity bone, such as a knee, made reproducible stiffness measurements more challenging.

3. The methodology involving technical subjects (especially physics inspired statistical models) is difficult to understand, please provide more details to make it clearer.

Author Response:

The physics inspired statistical model description was updated in lines 134-162. Greater effort was put in justifying the physics rational of the model. Further explanation for Equation 1, 2, and 3 was provided. Further justification was provided on why the model was forced through a 0 y-intercept in lines 159-163. A sentence was added into the statistical tests section to provide a quick explanation on how linear mixed effect models function (lines 129-131).

4. ‘…that the upper leg region is very likely to have a thicker layer of muscle than the lower arm region for most individuals.’, please add a ref here.

Author Response:

A citation from a previous study has been added to support this point with reference 27 in the updated bibliography. Muscle in the thigh tends to outweigh muscle in the arm, and the lower extremities exceed the upper extremities by partial volume. Lines 260-263 have been updated with this study’s work.

5. In summary, please ensure that your manuscript is prepared correctly (without any grammatical and spelling mistakes) and formatted before submitting a revision.

Author Response:

Various edits and corrections were made throughout the paper to improve the paper outside the above comments, such as removing first person language.

Attachment

Submitted filename: reviewer_response.docx

Decision Letter 1

Yaodong Gu

5 Dec 2022

PONE-D-22-21815R1Role of multi-layer tissue composition of musculoskeletal extremities for prediction of in vivo surface indentation response and layer deformationsPLOS ONE

Dear Dr. Erdemir,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jan 19 2023 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Yaodong Gu

Academic Editor

PLOS ONE

Journal Requirements:

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: (No Response)

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Partly

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: I Don't Know

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: No

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The author did not solve the comments raised by the reviewer in the previous round.

1. This manuscript examines how the soft tissue architecture contributed to the aggregate mechanical surface response across 8 different sites of the upper and lower extremities. There is a great insight into investigating the soft tissue. However, the abstract section and the results section mentioned that ‘the fat layer deformation was predicted best by the combined locations model, while the muscle layer deformation was predicted best by the location-specific model’, it’s not in line with the purpose presented in the paper, and the reviewer is confused as to whether the authors intend to compare the prediction effects of the two prediction models on soft tissue deformation or to prove how the soft tissue architecture contributed to the aggregate mechanical surface response across 8 different sites of the upper and lower extremities? The title and purpose were more inclined to explore the role of multi-layer tissue composition of musculoskeletal extremities for the prediction of in vivo surface indentation response and layer deformations. But in the suggestion section, the results are more inclined to compare the difference between the two prediction models.

2. The methods section of this manuscript is more important, the deformation simulation of soft tissue is an important part of calculated results, but the existing deformation calculation methods and the physical models are difficult to achieve high accuracy and real-time performance. Therefore, the author how to make sure the accuracy and applicability of the calculation method in the article? Is there any relevant literature reference?

3. The complex mechanical properties of human soft tissue structure are closely related to physiological and pathological states, so it is necessary to establish and adopt a suitable constitutive model to describe the deformation behavior of soft tissue in mechanical imaging. But the construction of this model is not mentioned in the methods section of the author. Please descript it in detail.

4. “two hypotheses were investigated to meet this goal”, but in the suggestion section, the reviewer did not see the author make a detailed discussion on hypothesis 2.

5. Fat tends to be over-predicted for the combined locations model suggesting the underprediction of muscle deformation is compensated by an over-prediction for fat deformation. Can specific analyses or quantitative data be used to demonstrate the interaction between fat and muscle deformation? Or provide relevant reference documentation.

6. As the author mentioned in the limitation part, there are big problems in the current research method, which is also the concern of the reviewer.

7. All Figure’s clarity is not enough, recommended to improve their quality. The format of the Table is wrong. There are many handwriting errors in the manuscript, such as too many spaces. Please check carefully. Figure 1 needs more comments to explain.

Reviewer #2: (No Response)

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2023 Apr 21;18(4):e0284721. doi: 10.1371/journal.pone.0284721.r004

Author response to Decision Letter 1


16 Jan 2023

Response to the Reviewer:

We thank the reviewer for their valuable feedback. Responses to the comments have been included below, with reference line numbers in the marked up manuscript.

Reviewer Specific Comments to the Corresponding Author:

1. This manuscript examines how the soft tissue architecture contributed to the aggregate mechanical surface response across 8 different sites of the upper and lower extremities. There is a great insight into investigating the soft tissue. However, the abstract section and the results section mentioned that ‘the fat layer deformation was predicted best by the combined locations model, while the muscle layer deformation was predicted best by the location-specific model’, it’s not in line with the purpose presented in the paper, and the reviewer is confused as to whether the authors intend to compare the prediction effects of the two prediction models on soft tissue deformation or to prove how the soft tissue architecture contributed to the aggregate mechanical surface response across 8 different sites of the upper and lower extremities? The title and purpose were more inclined to explore the role of multi-layer tissue composition of musculoskeletal extremities for the prediction of in vivo surface indentation response and layer deformations. But in the suggestion section, the results are more inclined to compare the difference between the two prediction models.

Author Response:

A new paragraph was added at the beginning of the discussion to more closely describe the interplay between layers. The discussion section was reworked to make it more clear how the discussion section was related to the two hypotheses. The abstract was also reworked for improved paper clarity.

2. The methods section of this manuscript is more important, the deformation simulation of soft tissue is an important part of calculated results, but the existing deformation calculation methods and the physical models are difficult to achieve high accuracy and real-time performance. Therefore, the author how to make sure the accuracy and applicability of the calculation method in the article? Is there any relevant literature reference?

Author Response:

The accuracy of the calculation method can be shown in Figure 4 and 5, showing the Physics based model has an error of around 25-30%. This was discussed in the newly added first discussion paragraph (lines 284-304). Whether this is sufficiently high accuracy would depend on the application of the models. These models requires only simple annotations of ultrasound for tissue thicknesses, which makes them usable without force transducers or camera systems. The models are probably less accurate than some complex models that exist in literature, but require only simple inputs and no parameter search. The value of the models depends on the scenario, which has been added in lines 291-301.

3. The complex mechanical properties of human soft tissue structure are closely related to physiological and pathological states, so it is necessary to establish and adopt a suitable constitutive model to describe the deformation behavior of soft tissue in mechanical imaging. But the construction of this model is not mentioned in the methods section of the author. Please descript it in detail.

Author Response:

This model is phenomenological spring based representation of layers. If this work used finite element analysis, it would need a constitutive model. Additionally, tissue behavior was approximated to springs in series rather than being modeled with a constitutive model such as the Mooney-Rivlin model due to a lack of time related data, such as rate dependency and accurate strain measurements across deformation. Spring based modeling is more common in mesh based applications [1], gait [2,3], or simplified modeling of extremities [4]. A benefit of this simplification is that a single metric for stiffness may allow for simpler comparison between regions and subjects as [1] and [2] note the benefit of simplification on providing understanding. Hyperelastic materials also still behave like linear elastic materials under small loads. The above response has been more clearly explained in several portions of the paper, in lines 59-66, 177-179, 299-303.

4. “two hypotheses were investigated to meet this goal”, but in the suggestion section, the reviewer did not see the author make a detailed discussion on hypothesis 2.

Author Response:

The discussion was reformatted to better align the discussion with the two hypotheses.

5. Fat tends to be over-predicted for the combined locations model suggesting the underprediction of muscle deformation is compensated by an over-prediction for fat deformation. Can specific analyses or quantitative data be used to demonstrate the interaction between fat and muscle deformation? Or provide relevant reference documentation.

Author Response:

This is what we are suspecting, based on the spring based coefficients. Because the problem was formulated as an optimization to aggregate surface response, many combinations of different spring stiffnesses are possible. The springs could be fit individually, but that requires annotation of the different layers at all times.

6. As the author mentioned in the limitation part, there are big problems in the current research method, which is also the concern of the reviewer.

Author Response:

Some of the limitations of this work, such as a lack of inclusion of demographic related parameters in the model are being addressed in future models built. Limitations such as lack of resolution to determine skin thickness are not addressable unless different ultrasound equipment is used, which may not be feasible in a hospital setting. The standard deviations for skin was greater than the actual measurement in this dataset, so its inclusion in a model would be just fitting to noise [5]. 25% accuracy may be sufficient depending on application.

7. All Figure’s clarity is not enough, recommended to improve their quality. The format of the Table is wrong. There are many handwriting errors in the manuscript, such as too many spaces. Please check carefully. Figure 1 needs more comments to explain.

Author Response:

Figures were formatted with the PACE editor provided by PLOS ONE. The authors also note that the PLOS ONE compiled submission PDF includes low-resolution preview images of the figures after the reference list. The function of these previews is to allow you to download the entire submission as quickly as possible. Click the link at the top of each preview page to download a high-resolution version of each figure. Figure 1 was elaborated upon in Lines 135-139.Tables were reformatted to include all non-title elements inside the table legend. Typographical errors in the manuscript were fixed in the resubmission and the authors thank the reviewer for pointing them out.

Bibliography:

1. Kähler K, Haber J, Seidel H-P. Geometry-based Muscle Modeling for Facial Animation.

2. Passive Dynamic Walking - Tad McGeer, 1990. Available: https://journals.sagepub.com/doi/abs/10.1177/027836499000900206

3. Whittington BR, Thelen DG. A Simple Mass-Spring Model with Roller Feet can induce the Ground Reactions Observed in Human Walking. J Biomech Eng. 2009;131: 011013. doi:10.1115/1.3005147

4. Butler RJ, Crowell HP, Davis IM. Lower extremity stiffness: implications for performance and injury. Clin Biomech. 2003;18: 511–517. doi:10.1016/S0268-0033(03)00071-8

5. Neumann EE, Owings TM, Schimmoeller T, Nagle TF, Colbrunn RW, Landis B, et al. Reference data on thickness and mechanics of tissue layers and anthropometry of musculoskeletal extremities. Sci Data. 2018;5: 180193. doi:10.1038/sdata.2018.193

Attachment

Submitted filename: second_reviewer_response.docx

Decision Letter 2

Yaodong Gu

6 Apr 2023

Role of multi-layer tissue composition of musculoskeletal extremities for prediction of in vivo surface indentation response and layer deformations

PONE-D-22-21815R2

Dear Dr. Erdemir,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

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Reviewer #1: Partly

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Reviewer #1: Yes

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Reviewer #1: Yes

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Acceptance letter

Yaodong Gu

14 Apr 2023

PONE-D-22-21815R2

Role of multi-layer tissue composition of musculoskeletal extremities for prediction of in vivo surface indentation response and layer deformations

Dear Dr. Erdemir:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Professor Yaodong Gu

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    Attachment

    Submitted filename: reviewer_response.docx

    Attachment

    Submitted filename: second_reviewer_response.docx

    Data Availability Statement

    Raw data is available at https://multisbeta.stanford.edu/ (doi.org/10.18735/S5R97F). Aggregated data for this study can be found at the Downloads section of the project website (https://simtk.org/projects/multis) or directly at https://simtk.org/frs/?group_id=1032.


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