Antibodies
|
Chicken anti-GFP (1:1000) |
Abcam |
Cat# ab13970, RRID: AB_300798 |
ouse anti-GFAP (1:1000) |
EMD Millipore |
Cat# MAB360, RRID: AB_11212597 |
Rabbit anti-Sox9 (1:650) |
EMD Millipore |
Cat# 211-032-171, RRID: AB_2239761 |
Guinea pig anti-GABA (1:200) |
EMD Millipore |
Cat# HAF016, RRID: AB_91011 |
Rabbit anti-MAOB (1:200) |
Proteintech |
Cat# 12602-1AP, RRID: AB_2137273 |
Mouse anti-mCherry (1:500 |
Abcam |
Cat# ab125096, RRID: AB_11133266 |
Rabbit anti-TRPA1 (1: 250) |
Abcam |
Cat# ab58844, RRID: AB_945957 |
Rabbit anti-BEST1 (1:250) |
GeneTex |
Cat# GTX33037, RRID: NA |
Goat anti-Chicken IgY (H+L) Secondary Antibody, Alexa Fluor™ 488 (1:500) |
Thermo Fisher |
Cat# A11039, RRID: AB_2534096 |
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 568 (1:500) |
Thermo Fisher |
Cat# A11036, RRID: AB_10563566 |
Goat anti-Mouse IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 568 (1:500) |
Thermo Fisher |
Cat# A11004, RRID: AB_2534072 |
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor™ Plus 488 (1:500) |
Thermo Fisher |
Cat# A32723, RRID: AB_2633275 |
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 647 (1:500) |
Thermo Fisher |
Cat# A21245, RRID: AB_2535813 |
Goat anti-Guinea Pig IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 568 (1:500) |
Thermo Fisher |
Cat# A11075, RRID: AB_2534119 |
Bacterial and virus strains
|
AAV2/9-pAAV-Gfap-Cre-P2A-TurboRFP |
Ung et al., 2021
|
NA |
AAV2/9-pAAV-U6-Trpa1 sgRNA-Gfap-mcherry |
This paper |
NA |
lenti-pSico-Maob shRNA (U6-loxP-CMV-EGFP-loxP-Maob shRNA) |
Yoon et al., 2014
|
NA |
AAV2/9-CMV-LSL-mCherry-U6-SCR-SE |
Kwak et al., 2020
|
NA |
AAV2/9-CMV-LSL-mCherry-U6-mBest1-sh-SE |
Kwak et al., 2020
|
NA |
AAV2/9-GFAP-MAOB-GFP |
This paper |
NA |
Experimental models: Organisms/strains
|
Ai96 (RCL-GCaMP6s) |
JAX lab |
RRID: IMSR_JAX:024106 |
Aldh1l1-CreER |
JAX lab |
RRID: IMSR_JAX:029655 |
Rosa26-LSL-Cas9 |
JAX lab |
RRID: IMSR_JAX:026175 |
Chemicals, peptides, and recombinant proteins
|
Tamoxifen |
Sigma |
Cat# T5648 |
Hoechst Nuclear Stain |
Thermo Fisher |
Cat# H3570 |
APV |
Tocris |
Cat# 0106 |
CNQX |
Tocris |
Cat# 1045 |
GABA |
Tocris |
Cat# 0344 |
BIC |
Tocris |
Cat# 0131 |
Critical commercial assays
|
Neural Tissue Dissociation Kit |
Miltenyl |
Cat# 130-094-802 |
Red Blood Cell Lysis Solution (10×) |
Thermo Fisher |
Cat# 130-094-183 |
Chromium Single Cell Gene Expression 3v3.1 kit |
10X genomics |
NA |
NextSeq 500/550 High Output Kit v2.5 (75 Cycles) |
Illumina |
Cat# 20024906 |
MACS Debris Removal Kit |
Miltenyl |
Cat# 130-109-398 |
MACS Dead Cell Removal Kit |
Miltenyl |
Cat# 130-090-101 |
MiniMACS Separator |
Miltenyl |
Cat# 130-042-102 |
Dynabeads MyOne Silane Beads |
Thermo Fisher |
Cat# 37002D |
Vectashield Antifade Mounting Medium |
Vector Laboratories |
Cat# H-1000 |
Deposited data
|
Astrocyte single cell data from GH and SH |
This paper |
GSE222785 |
Software and algorithms
|
ANYmaze |
Stoelting Co. |
NA |
Versadat |
Omnitech Electronics, Inc. |
NA |
10X Cell Ranger (3.0.2) |
10X genomics |
NA |
Seurat (version 4.1.0) |
Hao et al., 2021
|
NA |
DoubletFinder |
McGinnis et al., 2019
|
NA |
SingleR |
Aran et al. 2019
|
NA |
enrichR |
Kuleshov et al., 2016
|
|
ClampFit 10.7 software |
Molecular Devices LLC |
NA |
GECIquant |
Venugopal et al., 2019 |
NA |
AQuA |
Wang et al., 2019 |
NA |
Minianalysis |
Blue cell |
NA |
SigmaPlot 13 |
SYSTAT |
NA |
Prism 9 |
Graphad |
NA |
Imaris |
Oxford instruments |
NA |