Fig. 1.

Analysis of scRNA-seq data from control and IPF lung cells identifies a complex network of cell types. A A suspension of single cells was generated from lung explants of control or IPF patients and was subsequently sequenced using the 10X genomics scRNA platform. B t-SNE plot of cell clustering after data imputation (raw sequencing data: Morse et al.). C Expression heatmap of genes that are used to identify cell type in each cluster. D Cells in the t-SNE plots are colored according to their origin: control, IPF upper (IPF_UP) or lower lobe (IPF_LOW). E Cellular composition of each sample type