Skip to main content
. Author manuscript; available in PMC: 2023 Apr 23.
Published in final edited form as: J Phys Chem B. 2022 Feb 25;126(9):1885–1894. doi: 10.1021/acs.jpcb.1c10925

Table 1: Evaluation of the optimized R2-dynamic and S2-dynamic ensembles and original ensembles for ENSEMBLE, RANDOM, and MIXED pools with 8 experimental data types.

We report both the X-EISD score, and the root mean square deviations (RMSD) with experiments. The results shown here are optimized with all experimental data types. The experimental and back calculations errors for CSs (σexp=0.030.3 ppm; σq=0.30.5 ppm (hydrogen), 1.2–1.4 ppm (carbon)); JCs (σexp=0.5; σq,A=0.14, σq,B=0.03,σq,C=0.08); RDCs (σexp=1.0; σq=0.9); NOEs (σexp=4.05.0; σq=0.0001); PREs (σexp=1.253.625; σq=0.0001); smFRET <E> (σexp=0.02; σq=0.007); Rh (σexp=0.3; σq=0.8); SAXS (σexp=0.00080.002, σq=0.0006).

Experimental data type R2-Dynamic Pool S2-Dynamic Pool Original Pool

X-EISD Score RMSD X-EISD Score RMSD X-EISD Score RMSD
ENSEMBLE

CS (ppm) 117.5 (0.4) 0.3 (0.005) 117.9 (0.3) 0.34 (0.004) 110.1 (0.4) 0.51 (0)
JC (Hz) 43.68 (0.41) 0.16 (0.008) 41.2 (0.4) 0.21 (0.007) 43.3 (0.5) 0.18 (0.01)
RDC (Hz) −47.8 (0.003) 0.04 (0.005) −50.1 (0.2) 0.54 (0.02) −50.4 (0.2) 0.56 (0.03)
NOE () 534.8 (0.4) 2.6 (0.03) 533.7 (0.4) 2.7 (0.03) 532.2 (0.5) 2.8 (0.03)
PRE () 460.4 (2.1) 0.86 (0.06) 443.6 (1.0) 1.42 (0.03) 453.9 (1.7) 1.02 (0.11)
smFRET <E> 6.91 (0.05) 0.006 (0.003) 6.95 (0.03) 0.004 (0.002) 7.0 (0) 0 (0)
Rh () −0.42 (0) 0 −0.57 (0.02) 0.47 (0.03) −0.8 (0) 0.71 (0.04)
SAXS (Intensity) 458.3 (0.2) 0.001 (0) 458.0 (0.2) 0.001 (0) 457.9 (0.2) 0.001 (0)

RANDOM

CS (ppm) 118.3 (0.03) 0.33 (0.002) 109.59 (0.66) 0.47 (0.006) 103.6 (0.7) 0.55 (0.01)
JC (Hz) −47.6 (1.7) 0.78 (0.006) −34.39 (3.03) 0.73 (0.01) −25.7 (2.4) 0.7 (0.01)
RDC (Hz) −48.4 (0.02) 0.2 (0.007) 52.2 (0.02) 0.2 (0.007) −55.4 (0.6) 0.98 (0.04)
NOE () 506.0 (1.2) 4.3 (0.05) 526.03 (1.77) 3.20 (0.10) 528.5 (1.5) 3.06 (0.10)
PRE () 261.1 (4.0) 3.4 (0.03) 429.53 (5.61) 1.69 (0.11) 450.0 (4.4) 1.24 (0.12)
smFRET <E> 3.9 (0.7) 0.05 (0.006) 6.84 (0.15) 0.009 (0.006) 6.9 (0.1) 0.01 (0)
Rh () −0.42 (0.1) 0 −0.47 (0.1) 0 −0.4 (0) 0.14 (0.10)
SAXS (Intensity) 452.4 (0.9) 0.003 (0) 455.03 (0.81) 0.002 (0) 456.3 (0.4) 0.002 (0)

MIXED

CS (ppm) 118.6 (0.45) 0.34 (0.006) 119.6 (0.3) 0.32 (0.005) 115.5 (0.5) 0.49 (0.01)
JC (Hz) 41.2 (0.60) 0.21 (0.01) 39.59 (0.66) 0.23 (0.01) 41.4 (0.7) 0.21 (0.01)
RDC (Hz) −51.17 (0.35) 0.64 (0.03) −51.16 (0.3) 0.62 (0.03) −50.7 (0.3) 0.60 (0.03)
NOE () 535.8 (0.66) 2.6 (0.04) 533.02 (0.53) 2.81 (0.04) 539.4 (0.7) 2.28 (0.07)
PRE () 459.7 (2.3) 0.89 (0.06) 446.4 (1.8) 1.33 (0.03) 458.4 (4.3) 0.92 (0.11)
smFRET <E> 6.9 (0.08) 0.007 (0.004) 6.9 (0.05) 0.005 (0.004) 6.9 (0) 0.01 (0)
Rh () 0.54 (0.05) 0.41 (0.09) −0.46 (0.02) 0.21 (0.08) −0.7 (0) 0.69 (0.05)
SAXS (Intensity) 457.5 (0.33) 0.002 (0) 457.9 (0.2) 0.001 (0) 458.0 (0.2) 0.001 (0)