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. 2023 Apr 24;11:88. doi: 10.1186/s40168-023-01506-0

Table 1.

Prediction of psychological factor scores with PLS regression models based on species, KOs, and protein groups

Mood Metagenomic (species) Metagenomic (KOs) Metaproteomic (protein groups)
Q2 P R Q2 P R Q2 P R
POMS
 Total mood disturbance 0.6861  < 0.0001 0.8403 0.6388  < 0.0001 0.8179 0.5112  < 0.0001 0.7595
 Tension–anxiety 0.7718  < 0.0001 0.8490 0.4398  < 0.0001 0.7039 0.6664  < 0.0001 0.7363
 Anger–hostility 0.7993  < 0.0001 0.9075 0.4206  < 0.0001 0.7121 0.6918  < 0.0001 0.7782
 Fatigue–inertia 0.8901  < 0.0001 0.9350 0.6587  < 0.0001 0.8231 0.7415  < 0.0001 0.8415
 Depression–dejection 0.7174  < 0.0001 0.8364 0.5124  < 0.0001 0.7145 0.6369  < 0.0001 0.7545
 Confusion–bewilderment 0.9012  < 0.0001 0.8989 0.6554  < 0.0001 0.8369 0.7426  < 0.0001 0.8312
 Vigour–activity 0.7896  < 0.0001 0.8800 0.7897  < 0.0001 0.8768 0.8127  < 0.0001 0.9014
 Self-esteem 0.8358  < 0.0001 0.9071 0.8221  < 0.0001 0.8888 0.8061  < 0.0001 0.9041
SCL-90
 SUM-SCL90 0.7262  < 0.0001 0.8682 0.7581  < 0.0001 0.8738 0.7225  < 0.0001 0.7800
 Somatization 0.7413  < 0.0001 0.8291 0.7524  < 0.0001 0.8335 0.8439  < 0.0001 0.8822
 Obsessive–compulsive 0.9495  < 0.0001 0.9534 0.8352  < 0.0001 0.8968 0.7877  < 0.0001 0.8612
 Interpersonal sensitivity 0.8949  < 0.0001 0.9166 0.7748  < 0.0001 0.8400 0.8156  < 0.0001 0.8565
 Depression 0.8498  < 0.0001 0.9041 0.5676  < 0.0001 0.7735 0.6934  < 0.0001 0.8355
 Anxiety 0.8720  < 0.0001 0.9003 0.5757  < 0.0001 0.7749 0.7752  < 0.0001 0.8694
 Hostility 0.6883  < 0.0001 0.7702 0.5713  < 0.0001 0.6475 0.8045  < 0.0001 0.8310
 Phobic anxiety 0.9487  < 0.0001 0.6590 0.8935  < 0.0001 0.6529 0.8192  < 0.0001 0.6430
 Paranoid ideation 0.6615  < 0.0001 0.8227 0.7745  < 0.0001 0.8438 0.7557  < 0.0001 0.8665
 Psychoticism 0.8620  < 0.0001 0.7869 0.8162  < 0.0001 0.7041 0.7374  < 0.0001 0.8101
 Additional items 0.8619  < 0.0001 0.8627 0.6186  < 0.0001 0.7002 0.8214  < 0.0001 0.8490

Q2, goodness of prediction based on leave-one-out cross-validated PLS regression. R,P, Spearman’s correlation coefficient (R) and P-values