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. 2023 Apr 24;160:18. doi: 10.1186/s41065-023-00283-y

Table 1.

GO, KEGG and BIOCARTA analysis based on DAVID. (Up-DEGs between DMSO with CIS)

GO Category Count -Log2(P Value)
GOTERM_BP_DIRECT GO:0006334 ~ nucleosome assembly 22 42.403049
GOTERM_BP_DIRECT GO:0006335 ~ DNA replication-dependent nucleosome assembly 11 27.74878128
GOTERM_BP_DIRECT GO:0043065 ~ positive regulation of apoptotic process 29 21.32817221
GOTERM_BP_DIRECT GO:0060968 ~ regulation of gene silencing 6 16.60892704
GOTERM_BP_DIRECT GO:0008285 ~ negative regulation of cell proliferation 28 16.45457063
GOTERM_BP_DIRECT GO:0006954 ~ inflammatory response 26 15.93301132
GOTERM_BP_DIRECT GO:0000786 ~ nucleosome 24 40.02493217
GOTERM_BP_DIRECT GO:0005576 ~ extracellular region 87 27.93206549
GOTERM_BP_DIRECT GO:0005615 ~ extracellular space 85 22.10672588
GOTERM_BP_DIRECT GO:0000228 ~ nuclear chromosome 11 20.94169347
GOTERM_CC_DIRECT GO:0001533 ~ cornified envelope 10 15.2297727
GOTERM_CC_DIRECT GO:0016020 ~ membrane 204 12.79847186
GOTERM_CC_DIRECT GO:0005125 ~ cytokine activity 23 22.05968309
GOTERM_CC_DIRECT GO:0008083 ~ growth factor activity 17 18.742172
GOTERM_CC_DIRECT GO:0030527 ~ structural constituent of chromatin 5 15.99923777
GOTERM_CC_DIRECT GO:0,046,982 ~ protein heterodimerization activity 25 13.51717047
GOTERM_CC_DIRECT GO:0008330 ~ protein tyrosine/threonine phosphatase activity 5 12.88292008
GOTERM_CC_DIRECT GO:0017017 ~ MAP kinase tyrosine/serine/threonine phosphatase activity 5 11.8276452
GOTERM_CC_DIRECT mmu05322:Systemic lupus erythematosus 21 28.48228567
GOTERM_CC_DIRECT mmu05034:Alcoholism 22 22.65126955
GOTERM_MF_DIRECT mmu04613:Neutrophil extracellular trap formation 22 22.41079607
GOTERM_MF_DIRECT mmu05202:Transcriptional misregulation in cancer 20 16.57777767
GOTERM_MF_DIRECT mmu04668:TNF signaling pathway 14 16.49493421
GOTERM_MF_DIRECT mmu04657:IL-17 signaling pathway 12 14.60610374
GOTERM_MF_DIRECT m_stemPathway:Regulation of hematopoiesis by cytokines 6 11.73475312
GOTERM_MF_DIRECT m_erythPathway:Erythrocyte Differentiation Pathway 6 11.2031028
GOTERM_MF_DIRECT m_dspPathway:Regulation of MAP Kinase Pathways Through Dual Specificity Phosphatases 5 11.01320069
GOTERM_MF_DIRECT m_atmPathway:ATM Signaling Pathway 5 6.317244644
GOTERM_MF_DIRECT m_ngfPathway:Nerve growth factor pathway (NGF) 5 5.6012101
GOTERM_MF_DIRECT GO:0006334 ~ nucleosome assembly 22 42.403049
KEGG_PATHWAY GO:0006335 ~ DNA replication-dependent nucleosome assembly 11 27.74878128
KEGG_PATHWAY GO:0043065 ~ positive regulation of apoptotic process 29 21.32817221
KEGG_PATHWAY GO:0060968 ~ regulation of gene silencing 6 16.60892704
KEGG_PATHWAY GO:0008285 ~ negative regulation of cell proliferation 28 16.45457063
KEGG_PATHWAY GO:0006954 ~ inflammatory response 26 15.93301132
KEGG_PATHWAY GO:0000786 ~ nucleosome 24 40.02493217
KEGG_PATHWAY GO:0005576 ~ extracellular region 87 27.93206549
KEGG_PATHWAY GO:0005615 ~ extracellular space 85 22.10672588
KEGG_PATHWAY GO:0000228 ~ nuclear chromosome 11 20.94169347
KEGG_PATHWAY GO:0001533 ~ cornified envelope 10 15.2297727
BIOCARTA GO:0016020 ~ membrane 204 12.79847186
BIOCARTA GO:0005125 ~ cytokine activity 23 22.05968309
BIOCARTA GO:0008083 ~ growth factor activity 17 18.742172
BIOCARTA GO:0030527 ~ structural constituent of chromatin 5 15.99923777
BIOCARTA GO:0046982 ~ protein heterodimerization activity 25 13.51717047
BIOCARTA GO:0008330 ~ protein tyrosine/threonine phosphatase activity 5 12.88292008
BIOCARTA GO:0017017 ~ MAP kinase tyrosine/serine/threonine phosphatase activity 5 11.8276452