Table 1.
Plasma proteins associated with incident type 2 diabetes in CHS after full covariate adjustment
| UniProt identifier | Gene symbol | Target protein name | HR (95% CI) | P value | Also associated with | Prior evidence† | |
|---|---|---|---|---|---|---|---|
| Glucose* | IVGTT‡ | ||||||
| Q9BRK3 | MXRA8 | Matrix-remodeling-associated protein 8 | 0.65 (0.57–0.73) | 1.8 × 10−12 | Yes | SI, AIRG, DI, SG | Yes |
| Q92729 | PTPRU | Receptor-type tyrosine-protein phosphatase U | 1.32 (1.21–1.43) | 2.4 × 10−11 | No | SI, DI, SG | Yes |
| P08236 | GUSB | β-glucuronidase | 1.46 (1.30–1.63) | 2.5 × 10−11 | Yes | SI, DI, SG | No |
| P42785 | PRCP | Lysosomal Pro-X carboxypeptidase | 1.46 (1.31–1.64) | 5.4 × 10−11 | Yes | SI, DI | Yes |
| Q03154 | ACY1 | Aminoacylase-1 | 1.36 (1.24–1.48) | 5.6 × 10−11 | No | SI, AIRG, DI | Yes |
| Q13790 | APOF | Apolipoprotein F | 0.68 (0.61–0.77) | 7.2 × 10−11 | Yes | SI, AIRG, DI | Yes |
| P18065 | IGFBP2 | Insulin-like growth factor–binding protein 2 | 0.66 (0.58–0.75) | 2.8 × 10−10 | Yes | SI, AIRG, DI | Yes |
| Q15848 | ADIPOQ | Adiponectin | 0.68 (0.61–0.77) | 4.0 × 10−10 | Yes | SI, DI, SG | Yes |
| P52758 | HRSP12 | Ribonuclease UK114 | 1.34 (1.21–1.47) | 3.1 × 10−9 | No | SI, DI | Yes |
| P82980 | RBP5 | Retinol-binding protein 5 | 1.30 (1.19–1.42) | 1.1 × 10−8 | No | SI, DI | Yes |
| P14384 | CPM | Carboxypeptidase M | 1.32 (1.20–1.46) | 1.9 × 10−8 | Yes | SI, DI | Yes |
| P55103 | INHBC | Inhibin β C chain | 1.40 (1.25–1.58) | 2.3 × 10−8 | Yes | SI, AIRG, DI | Yes |
| P07327 | ADH1A | Alcohol dehydrogenase 1A | 1.28 (1.17–1.40) | 3.0 × 10−8 | No | SI, AIRG, DI | Yes |
| P04278 | SHBG | Sex hormone–binding globulin | 0.72 (0.64–0.81) | 3.5 × 10−8 | No | SI, AIRG, DI | Yes |
| P10912 | GHR | Growth hormone receptor | 1.40 (1.24–1.58) | 6.5 × 10−8 | Yes | SI, AIRG, DI | Yes |
| Q9BU40 | CHRDL1 | Chordin-like protein 1 | 0.69 (0.61–0.79) | 7.1 × 10−8 | Yes | SI, AIRG | Yes |
| P07306 | ASGR1 | Asialoglycoprotein receptor 1 | 1.29 (1.17–1.41) | 7.4 × 10−8 | No | SI, DI | No |
| P09467 | FBP1 | Fructose-1,6-bisphosphatase 1 | 1.28 (1.17–1.39) | 8.9 × 10−8 | No | SI, AIRG, DI | Yes |
| Q86TH1 | ADAMTSL2 | ADAMTS-like protein 2 | 1.30 (1.18–1.43) | 1.0 × 10−7 | No | SI, AIRG, DI | Yes |
| Q8WXD2 | SCG3 | Secretogranin-3 | 0.74 (0.66–0.82) | 1.1 × 10−7 | No | SI, AIRG, DI | Yes |
| O94933 | SLITRK3 | SLIT and NTRK-like protein 3 | 0.75 (0.67–0.83) | 1.2 × 10−7 | No | SI, AIRG, DI | Yes |
| Q03167 | TGFBR3 | Transforming growth factor β receptor type 3 | 0.74 (0.66–0.83) | 1.3 × 10−7 | No | SI, AIRG, DI | Yes |
| P23141 | CES1 | Liver carboxylesterase 1 | 1.29 (1.17–1.43) | 2.1 × 10−7 | No | SI, DI | No |
| P00326 | ADH1C | Alcohol dehydrogenase 1C | 1.28 (1.16–1.40) | 3.1 × 10−7 | No | SI, DI | No |
| Q6UXZ4 | UNC5D | Netrin receptor UNC5D | 0.72 (0.63–0.82) | 3.1 × 10−7 | No | SI, AIRG, DI | Yes |
| Q9BZR6 | RTN4R | Reticulon-4 receptor | 1.34 (1.20–1.50) | 3.9 × 10−7 | Yes | SI, DI | Yes |
| Q8N142 | ADSSL1 | Adenylosuccinate synthetase isozyme 1 | 1.26 (1.15–1.37) | 3.9 × 10−7 | No | SI, DI | Yes |
| P05062 | ALDOB | Fructose-bisphosphate aldolase B | 1.27 (1.16–1.40) | 4.3 × 10−7 | No | SI, AIRG, DI | No |
| O15335 | CHAD | Chondroadherin | 0.76 (0.68–0.84) | 4.6 × 10−7 | No | SI, DI | Yes |
| O15031 | PLXNB2 | Plexin-B2 | 1.36 (1.21–1.54) | 6.1 × 10−7 | No | SI, AIRG | No |
| Q99727 | TIMP4 | Metalloproteinase inhibitor 4 | 0.74 (0.66–0.84) | 6.2 × 10−7 | No | AIRG, DI | Yes |
| P04424 | ASL | Argininosuccinate lyase | 1.25 (1.15–1.37) | 8.7 × 10−7 | No | SI, AIRG, DI | Yes |
| O94856 | NFASC | Neurofascin | 1.22 (1.13–1.33) | 9.4 × 10−7 | No | SG | No |
| P08319 | ADH4 | Alcohol dehydrogenase 4 | 1.26 (1.15–1.38) | 9.9 × 10−7 | No | SI, AIRG, DI | Yes |
| Q99519 | NEU1 | Sialidase-1 | 1.18 (1.11–1.27) | 1.1 × 10−6 | No | SI, DI | Yes |
| Q9NQ79 | CRTAC1 | Cartilage acidic protein 1 | 0.77 (0.69–0.86) | 1.1 × 10−6 | No | SI, DI, SG | No |
| Q00796 | SORD | Sorbitol dehydrogenase | 1.29 (1.16–1.42) | 1.2 × 10−6 | No | SI, AIRG, DI | No |
| O95954 | FTCD | Formimidoyltransferase-cyclodeaminase | 1.28 (1.16–1.41) | 1.4 × 10−6 | No | SI, DI | Yes |
| Q6NW40 | RGMB | RGM domain family member B | 0.73 (0.64–0.83) | 1.5 × 10−6 | No | SI, AIRG, DI | Yes |
| Q7Z3B1 | NEGR1 § | Neuronal growth regulator 1§ | 0.74 (0.65–0.84) | 1.7 × 10−6 | No | SI, DI, SG | Yes |
| Q96EE4 | CCDC126 | Coiled-coil domain-containing protein 126 | 0.76 (0.68–0.85) | 1.7 × 10−6 | No | SI, AIRG, DI, SG | Yes |
| O00468 | AGRN | Agrin | 1.27 (1.15–1.41) | 2.4 × 10−6 | No | SI, DI | No |
| Q969E1 | LEAP2 | Liver-expressed antimicrobial peptide 2 | 1.29 (1.16–1.44) | 2.4 × 10−6 | No | No | Yes |
| Q99972 | MYOC | Myocilin | 0.77 (0.69–0.86) | 2.9 × 10−6 | No | No | No |
| Q13478 | IL18R1 | Interleukin-18 receptor 1 | 1.21 (1.12–1.32) | 3.6 × 10−6 | No | SI, DI | Yes |
| Q13332 | PTPRS | Receptor-type tyrosine-protein phosphatase S | 0.78 (0.70–0.87) | 3.7 × 10−6 | No | SI, AIRG, DI | Yes |
| Q01581 | HMGCS1 | Hydroxymethylglutaryl-CoA synthase, cytoplasmic | 1.27 (1.15–1.40) | 3.9 × 10−6 | No | SI | Yes |
| Q9Y617 | PSAT1 | Phosphoserine aminotransferase | 1.25 (1.14–1.37) | 4.0 × 10−6 | No | SI, AIRG, DI | Yes |
| P35442 | THBS2 | Thrombospondin-2 | 1.26 (1.14–1.39) | 4.5 × 10−6 | No | AIRG, DI | Yes |
| Q8TF66 | LRRC15 | Leucine-rich repeat-containing protein 15 | 0.77 (0.69–0.86) | 4.8 × 10−6 | No | SI, DI | No |
| Q96GG9 | DCUN1D1 | DCN1-like protein 1 | 1.22 (1.12–1.34) | 9.4 × 10−6 | No | SI | Yes |
| Q9POT7 | TMEM9 | Transmembrane protein 9 | 0.99 (0.88–1.10) | 0.40 | Yes | No | No |
The model was adjusted for age, sex, race, clinic site, estimated glomerular filtration rate, BMI, smoking status, alcohol consumption status, and education. AIRG, acute insulin response to glucose; DI, Disposition index; HR, hazard ratio; SI: insulin sensitivity; SG: glucose response. HR presents change in risk per SD increase in log2 protein unit at baseline.
Also associated with longitudinal glucose in the CHS cohort.
Also associated with at glycemic traits in the HERITAGE cohort.
Published proteomic associations with incident type 2 diabetes.
Targeted by two distinct aptamers; summary statistics for both are reported in the Supplementary Material.