Table 1.
Oligos used in this study.The oligo location is referring to the exon number in the RefSeq NM_003017.5 for human SRSF3 and NM_013663.5 for mouse Srsf3. RACE, rapid amplification of cDNA ends; NB, Northern blot.
| Name | Sequence (5′-3′) | Genome | Chromosome position | Strand | Location | Assay |
|---|---|---|---|---|---|---|
| oVM238 | TTTTTCACCATTCGACAGTT | hg38 | chr6:36598897-36598878 | – | exon 3 | 5′ RACE/NB |
| oJR56 | TCTCTTGAAACAGTGACACAAAGGTG | hg38 | chr6:36602126-36602151 | + | exon 7 | 3′ RACE |
| oMA28 | TTCTGAGTGGTCCATAATAGC | mm10 | chr17:29036354–29036334 | – | exon 2 | 5′ RACE/NB |
| oLLY531 | GGCACGTGATATCAAGAATTGTTACT | mm10 | chr17:29041610–29041635 | + | exon 7 | 3′ RACE |
| oMA229 | CGAGATCCTGGGTTCAAAAG | mm10 | chr17:29032786–29032767 | – | exon 1 | NB |
| oLLY537 | TTCCACTCTTACACGGCAGC | mm10 | chr17:29038520–29038501 | – | exon 3 | NB |