Table 1. Properties of variants with substitution of conserved histidine, lysine and tyrosine residues in the C-terminal catalytic domain of the murine CAD.
Residue | Substitution | ICAD-L bindinga | Relative DNA cleavage activity (%)b | Oligomeric state | DNA bindingc | Remark |
---|---|---|---|---|---|---|
Wild-type | – | + | 100 | wt | wt | |
Lys155 | Gln | + | n.d.c. | wt | wt | |
Lys301 | Gln | + | 1.4 | wt | wt | |
Lys310 | Gln | + | 2.3 | wt | wt | |
Tyr170 | Phe | + | 107.0 | wt | wt | Fragment pattern |
Tyr247 | Phe | + | 1.2 | wt | wt | |
His127 | Asnd | + | 25.8 | wt | n.d.e | |
His242 | Asnd | + | 6.3 | Deviating | n.d.e | Fragment pattern |
Glu | + | <1.0 | wt | wt | ||
Arg | + | <1.0 | wt | wt | ||
His263 | Asnd | + | 0.7 | wt | n.d.e | |
Asp | + | <1.0 | wt | wt | ||
Arg | + | <1.0 | wt | wt | ||
His304 | Asnd | + | 14.5 | wt | n.d.e | |
His308 | Asnd | + | 9.3 | wt | n.d.e | Fragment pattern |
Asp | + | ∼1–2 | wt | wt | Residual activity at pH 5.0 | |
Arg | + | <1.0 | wt | wt | ||
His313 | Asnd | + | 1.3 | wt | n.d.e | |
Asp | + | <1.0 | wt | wt | ||
Arg | + | 109.0 | wt | wt | Fragment pattern |
n.d., not determined; n.d.c., no detectable cleavage; wt, wild-type-like.
aICAD-L binding measured by co-purification of untagged hICAD-L with GST-mCAD.
bMeasured by the disappearance of supercoiled plasmid DNA in steady state cleavage experiments.
cBinding of free GST-mCAD to DNA–cellulose.
dThe properties of these variants were described in Meiss et al. (17).
eSakahira et al. (16) have demonstrated DNA binding for the alanine substitutions at the indicated positions in murine CAD. With the exception of H242A, all other variants bound to DNA–cellulose, similar to wild-type CAD.