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. 2023 Apr 14;12(8):1158. doi: 10.3390/cells12081158

Table 1.

Main representatives for taxonomic gut microbial composition, adapted from Rinninella et al. [18].

Main GI
PHYLUM
CLASS
Examples
ORDER
Examples
FAMILY
Examples
GENUS
Examples
SPECIES
Examples
Actinomycetota Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium
Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium longum
Bifidobacterium bifidum
Coriobacteria Coriobacteriales Coriobacteriaceae Atopobium
Bacillota Clostridia Clostridiales Clostridiaceae Faecalibacterium Faecalibacterium prausnitzii
Clostridium Clostridum spp.
Lachnospiraceae Roseburia Roseburia intestinalis
Ruminococcaceae Ruminococcus Ruminococcus faecis
Negativicutes Veillonellales Veillenellaceae Dialister Dialister invisus
Bacili Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus reuteri
Enterococcaceae Enterococcus Enterococcus faecium
Bacillales Staphylocaccaceae Staphylococcus Staphylococcus leei
Bacteroidota Sphingobacteria Sphingobacteriales Sphingobacteriaceae Sphingobacterium
Bacteroidia Bacteroidales Bacteridaceae Bacteroides Bacteroides fragilis
Bacteroides vulgatus
Bacteroides uniformis
Tannerellaceae Tanarella
Parabacteroides Parabacteroides diastonis
Rikenellaceae Alistipes Alistipes finegolddi
Prevotellaceae Prevotella Prevotella spp.
Pseudomonadota Gamma proteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
Shigella Shigella flexneri
Delta proteobacteria Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio intestinalis
Bilophila Bilophila wadsworthia
Epsilon proteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia muciniphila