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. 2023 Apr 14;4(4):100729. doi: 10.1016/j.patter.2023.100729

Table 3.

Ablation study on optimization adjustments in fine-tuning by comparing BIOSSES test performance under various pretraining settings

Pretraining setting Improved optimization Standard epochs No bias correction
BERT 93.46∗ 92.64 91.75
BERT (no NSP) 93.12∗ 91.31 92.35
BERT (no NSP, single seq) 75.50∗ 0.65 70.50
ELECTRA 80.24 49.87 80.41∗

Improved optimization used bias correction in ADAM and up to 100 epochs in fine-tuning (vs. up to five epochs in standard setting), all with BASE models.

∗

Highest performance for model (row).