TABLE 4.
GenBank clones that include the sequence region from position 21 to position 958 and match group I or group II probes
| Clone or organism | OTU | Origin | Reference |
|---|---|---|---|
| SBAR5 | I-OAa | Marine plankton, surface | 8 |
| SBAR12 | I-AA | Marine plankton, surface | 8 |
| SBAR1A | II-EE | Marine plankton, surface | 8 |
| SBAR16 | II-KA | Marine plankton, surface | 8 |
| WHARQ | I-CA | Marine plankton, surface | 8 |
| WHARN | II-CL | Marine plankton, surface | 8 |
| OARB | II-BB | Marine plankton, surface | 9 |
| ANT12 | I-AA | Marine plankton, surface | 9 |
| ANT5 | II-CL | Marine plankton, surface | 9 |
| FB7 | I-BB | Marine plankton, 200 m | 4 |
| Cenarchaeum symbiosum | I-PB | Sponge endosymbiont | 41 |
| PVA-OTU2 | I-CD | Hydrothermal vent, 1,000 m | 31 |
| PVA-OTU3 | I-ED | Hydrothermal vent, 1,000 m | 31 |
| PVA-OTU4 | I-CD | Hydrothermal vent, 1,000 m | 31 |
| PVA-OTU1 | II-FH | Hydrothermal vent, 1,000 m | 31 |
| LMA137 | I-AF | Freshwater sediment, 100 m | 24 |
| LMA226 | I-JD | Freshwater sediment, 100 m | 24 |
| LMA229 | I-AD | Freshwater sediment, 100 m | 24 |
| LMA238 | I-AF | Freshwater sediment, 100 m | 24 |
| FF619 | II-EH | Marine fish digestive tract | 47 |
| FF620 | II-EH | Marine fish digestive tract | 47 |
| FIN625 | II-FH | Marine fish digestive tract | 47 |
| TS10C286 | I-CD | Marine particles | 47 |
| TS10C299 | I-CD | Marine particles | 47 |
| TS235C306 | I-CD | Marine particles | 47 |
| TS235C310 | I-AI | Marine particles | 47 |
| TS10C294 | II-FH | Marine particles | 47 |
| TS10C298 | II-EH | Marine particles | 47 |
| TS235C302 | II-ED | Marine particles | 47 |
| JTA47 | I-AA | Marine sediments, 6,400 m | —b |
| JTA266 | I-SA | Marine sediments, 6,400 m | — |
| JTB153 | I-RA | Marine sediments, 6,400 m | — |
| JTB167 | I-EA | Marine sediments, 6,400 m | — |
| JTB168 | I-CA | Marine sediments, 6,400 m | — |
| Mar-Ar-1 | I-TD | Marine sediments, 11,000 m | 23 |
| Mar-Ar-11 | I-TD | Marine sediments, 11,000 m | 23 |
| Mar-Ar-15 | I-RA | Marine sediments, 11,000 m | 23 |
| C6 | I-AA | Marine plankton, 500 m | — |
| C20 | I-AG | Marine plankton, 500 m | — |
| C33 | I-CA | Marine plankton, 500 m | — |
| C46 | I-AA | Marine plankton, 500 m | — |
| C48 | I-AA | Marine plankton, 500 m | — |
| PM7 | I-QB | Marine plankton, 500 m | — |
| PM8 | I-QH | Marine plankton, 500 m | — |
a
Boldface type indicates an OTU that was not represented in our libraries.
b
—, data obtained from GenBank (unpublished data).