Table 4.
Summary of the datasets utilized in various publications of deep generative models, organized by modality and body part. For each dataset, the corresponding availability is indicated as public, private, or under certain conditions (UC). Additionally, if a public link for the dataset is available, it is provided.
| Abbreviation | Reference | Availability | Dataset | Modality | Anatomy |
|---|---|---|---|---|---|
| ADNI | UC | Alzheimers disease neuroimaging Initiative | MR, PET | Brain | |
| BraTS2015 | Public | Brain tumor segmentation challenge | MR | Brain | |
| BraTS2016 | Public | Brain tumor segmentation challenge | MR | Brain | |
| BraTS2017 | Public | Brain tumor segmentation challenge | MR | Brain | |
| BraTS2019 | Public | Brain tumor segmentation challenge | MR | Brain | |
| BraTS2020 | Public | Brain tumor segmentation challenge | MR | Brain | |
| IEEE CCX | Public | IEEE Covid Chest X-ray dataset | X-ray | Lung | |
| UK Biobank | UC | UK Biobank | MR | Brain, Heart | |
| NIHPCT | Public | National Institutes of Health Pancreas-CT dataset | CT | Kidney | |
| DataDecathlon | Public | Medical Segmentation Decathlon dataset | CT | Liver, Spleen | |
| MIDAS | [124] | Public | Michigan institute for data science | MR | Brain |
| IXI | Public | Information eXtraction from Images Dataset | MR | Brain | |
| DRIVE | [125] | Public | Digital Retinal Images for Vessel Extraction | Fundus photography | Retinal fundus |
| ACDC | [126] | Public | Automated Cardiac Diagnosis Challenge | MR | Heart |
| MRI-CT PTGA | [105] | Public | MRI-CT Part of the Gold Atlas project | CT, MR | Pelvis |
| ICTS | [50] | Public | National Taiwan University Hospital’s Intracranial Tumor Segmentation dataset | MR | Brain |
| CXR8 | [127] | Public | ChestX-ray8 | X-ray | Lung |
| C19CT | Public | COVID-19 CT segmentation dataset | CT | Lung | |
| TCGA | Private | The Cancer Genome Atlas Program | Microscopy | - | |
| UKDHP | [128] | UC | UK Digital Heart Project | MR | Heart |
| SCR | [129] | Public | SCR database: Segmentation in Chest Radiographs | X-ray | Lung |
| HCP | [130] | Public | Human connectom project dataset | MR | Brain |
| AIBL | UC | Australian Imaging Biomarkers and Lifestyle Study of Ageing | MR, PET | Brain | |
| OpenfMRI | Public | OpenfMRI | MR | Brain | |
| IBC | Public | Individual Brain Charting | MR | Brain | |
| NeuroSpin | Private | Institut des sciences du vivant Frédéric Joliot | MR | Brain | |
| OASIS | Public | The Open Access Series of Imaging Studies | MR | Brain | |
| APCXR | [131] | Public | The anterior-posterior Chest X-Ray dataset | X-ray | Lung |
| Fitzpatrick | [132] | Public | Fitzpatrick17k dataset | Dermoscopy | Skin |
| ISIC | Public | The International Skin Imaging Collaboration dataset | Dermoscopy | Skin | |
| DDSM | Public | The Digital Database for Screening Mammography | CT | Breast | |
| CBIS-DDMS | Public | Curated Breast Imaging Subset of DDSM | CT | Breast | |
| LIDC-IDRI | Public | The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI) | CT | Lung | |
| COVID-CT | [133] | Public | - | CT | Lung |
| SARS-COV2 | [134] | Public | CT | Lung | |
| MIMIC-CXR | [135] | Public | Massachusetts Institute of Technology | CT | Lung |
| PPMI | Public | Parkinson’s Progression Markers Initiative | MR | Brain | |
| ADHD | Public | Attention Deficit Hyperactivity Disorder | MR | Brain | |
| MRNet | Public | MRNet dataset | MR | Knee | |
| MLSP | Public | MLSP 2014 Schizophrenia Classification Challenge | MR | Brain | |
| SABRE | [136] | Public | The Southall and Brent Revisited cohort | MR | Brain, Heart |
| ABIDE | Public | The Autism Brain Imaging Data Exchange | MR | Brain | |
| OPMR | [137] | Public | Open-source prostate MR data | MR | Pelvis |
| MaCheX | [115] | Public | Massive Chest X-ray Dataset | X-ray | Lung |