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. 2023 Apr 29;14:2488. doi: 10.1038/s41467-023-38202-4

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — The phylogenetic trees were estimated based on a full genome sequences, and the b gB, (c) gC, d gD, and e gE genes, utilizing the best-fit nucleotide substitution model obtained by IQ-TREE (Minh et al., 2020). All trees were midpoint rooted. Numbers (>80) above branches are percentage bootstrap values for the major nodes. The scale bar represents the number of substitutions per site. Red circles indicate the six tiger- and porcupine-isolated PRVs generated in this study. f Similarity plot of the full-length PRV genome of porcupine PRV against sequences of a genotype I strain (JF797218.1) and two genotype II strains (KU552118.1 and MT949536.1). The parameters for the similarity plots are: window, 200 bp; step, 50 bp.