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A) Ground truth corticothalamic connectivity matrix generated from Allen Mouse Brain Connectivity Atlas (AMBCA). Tractography based average (n = 10) corticothalamic matrices generated under six conditions (Table 2): B) Using conventional tractography (NCT) and C) Using anatomically constrained tractography (ACT). D) Graph showing the percentages (%) of detection of TP, FP, and FN connections using different imaging and tractography parameters.
