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. 2023 May 1;3(5):738–754. doi: 10.1158/2767-9764.CRC-22-0402

TABLE 1.

Variants in cancer predisposition genes (class 1–2) in the wildtype and variant TP53 cohorts, annotated with cancer type, sex, LFS criteria, inheritance status, segregation, variant location, variant function, and zygosity

Patient ID Family ID TP53 status Cancer type (age at diagnosis, months) Sex Gene Class LFS criteria Inheritance status Segregation Variant Variant function Zygosity
3298A MUT12 Mut Adrenocortical carcinoma (21) F BRCA1 1 Unknown Unknown Unknown NM_007294:exon2: c.68_69del:p.E23fs frameshift deletion Het
2766 WT4 Wt Embryonal rhabdomyosarcoma (24) M BRCA1 1 Classic Inherited Cancer segregating NM_007294:exon10:c. 5266dup:p.Gln1756fs frameshift deletion Het
2768 WT4 Wt Low grade glioma (516) M BRCA1 1 Classic Unknown Cancer segregating NM_007294:exon10:c. 5266dup:p.Gln1756fs nonsynonymous SNV Het
1478 MUT52 Mut Unaffected M ERCC3 2 Chompret Unknown Unaffected segregating NM_000122:exon3:c. 325C>T:p.Arg109Ter nonsynonymous SNV Het
1478 MUT52 Mut Unaffected M WRN 2 Chompret Unknown Unaffected segregating NM_000553:exon24:c. 2856_2857del:p.S952fs nonsynonymous SNV Het
3273 MUT76 Mut Unaffected M FANCM 2 Classic Not inherited from Mom Unaffected segregating NM_020937:exon11:c. 5791C>T:p.Arg1931Ter stopgain Het
SJACT007 MUTSJ7 Mut Adrenocortical carcinoma M ERCC3 2 Unknown Unknown Unknown NM_000122:exon8: c.1120_1121insAGCAGT: p.W374delinsX frameshift deletion Het
1970 WT2 Wt Osteosarcoma (164) M XPC 2 Birch Inherited Shared NM_004628:exon1: c.C55T:p.Q19X stopgain Het
1972 WT2 Wt Unaffected F XPC 2 Birch Unknown Shared NM_004628:exon1: c.C55T:p.Q19X stopgain Het
3021 WT6 Wt Basal cell carcinoma (648) F ATM 2 Classic Unknown Cancer segregating NM_000051:exon49: c.T7271G:p.V2424G splicing Het
4093 WT6 Wt Anorectal melanoma (319) F ATM 2 Classic Inherited Cancer segregating NM_000051:exon49: c.T7271G:p.V2424G stopgain Het