Antibodies |
Rabbit monoclonal anti-caspase-1_p20, clone D7F10 |
Cell Signaling Technology |
Cat# 3866; RRID:AB_2069051 |
Rabbit monoclonal cleaved anti-caspase-1, clone D57A2 |
Cell Signaling Technology |
Cat# 4199; RRID: AB_1903916 |
Mouse monoclonal cleaved anti-caspase-1, clone casper-1 |
AdipoGen |
Cat# AG-20B0042; RRID: AB_2490248 |
Mouse monoclonal anti-caspase-1, clone 1021323 |
R&D Systems |
Cat# MAB62152 |
Mouse monoclonal anti-caspase-1 (p10), clone casper-2 |
AdipoGen |
Cat# AG-20B-0044-C100; RRID:AB_2490253 |
Rabbit monoclonal cleaved anti-gasderminD |
Abcam |
Cat# ab209845; RRID:AB_2783550 |
Rabbit monoclonal cleaved anti-gasderminD, Clone E7H9G |
Cell Signaling Technology |
Cat# 36425; RRID:AB_2799099 |
Rabbit monoclonal anti-gasderminD, clone L60 |
Cell Signaling Technology |
Cat# 93709; RRID:AB_2800210 |
Mouse monoclonal anti-NLRP3, clone Cryo-2 |
AdipoGen |
Cat# AG20B0014; RRID:AB_2885199 |
Rabbit polyclonal anti-NLRP3, clone D4D8T |
Cell Signaling Technology |
Cat# 15101; RRID:AB_2722591 |
Mouse monoclonal anti-GFP, clone B-2 |
Santa Cruz |
Cat# SC9996; RRID:AB_627695 |
Rabbit monoclonal anti-GFP, clone D5.1 |
Cell Signaling Technology |
Cat# 2956; RRID:AB_1196615 |
Rabbit polyclonal anti-ASC, clone AL177 |
AdipoGen |
Cat# AG25B0006; RRID:AB_2490440 |
Mouse monoclonal anti-β-tubulin, clone DSHB, AA12.1 |
Developmental Studies Hybridoma Bank |
Cat# AA12.1 |
Rabbit polyclonal anti-IL-1β |
Santa Cruz |
Cat# SC7884; RRID:AB_2124476 |
Rabbit monoclonal cleaved anti-IL-1b, clone D3A3Z |
Cell Signaling Technology |
Cat# 83186; RRID: AB_2800010 |
Rabbit monoclonal anti-IL-1β |
Cell Signaling Technology |
Cat# 52719; RRID:AB_2799421 |
Mouse monoclonal anti-IL-1β |
Cell Signaling Technology |
Cat# 12242; RRID:AB_2715503 |
HRP conjugated secondary anti-rabbit |
Invitrogen |
Cat# 31460 |
HRP conjugated secondary anti-mouse |
Invitrogen |
Cat# 32430 |
HRP conjugated secondary anti-goat |
Invitrogen |
Cat# A15999 |
Rabbit monoclonal cleaved anti- caspase-3, clone 5A1E |
Cell Signaling Technology |
Cat# 9664; RRID:AB_2070042 |
Rabbit monoclonal anti-caspase-3, clone D3R6Y |
Cell Signaling Technology |
Cat# 14220; RRID:AB_2798429 |
Anti-Caspase-8 |
Cell Signaling Technology |
Cat# 4927; RRID:AB_2068301 |
Rabbit monoclonal cleaved caspase-8, clone D5B2 |
Cell signaling Technology |
Cat# 8592; RRID:AB_10891784 |
Anti-caspase-9 |
Cell Signaling Technology |
Cat# 9504; RRID:AB_2275591 |
Anti-cleaved caspase-9 |
Cell signaling Technology |
Cat# 9509; RRID:AB_2073476 |
Mouse monoclonal cleaved anti-PARP |
Cell signaling Technology |
Cat# 9548; RRID:AB_2160592 |
cleaved anti-Caspase-3 (Asp175) |
Cell Signaling Technology |
Cat# 9661; RRID:AB_2341188 |
Rabbit monoclonal cleaved PARP (Asp214) |
Cell Signaling Technology |
Cat#5625; RRID:AB_10699459 |
Anti-mouse CD45.2-BV570, clone 104 |
Biolegend |
Cat# 109833 |
Anti-mouse Ly6G-BV785, clone 1A8 |
Biolegend |
Cat#127645 |
Anti-mouse CD3e-BV785, clone 145-2C11 |
Biolegend |
Cat# 100355 |
Anti-mouse CD19-BV785, clone 6D5 |
Biolegend |
Cat# 115543 |
Anti-mouse NK-1.1-BV785, clone PK136 |
Biolegend |
Cat# 108749 |
PE-CF594 Rat anti-mouse SiglecF, clone E50-2440 |
BD Biosciences |
Cat# 562757 |
BB700 Rat Anti-Cd11b, clone M1/70 |
BD Biosciences |
Cat# 566417 |
Alexa Fluor 700 anti-mouse Cd11c, clone N418 |
Biolegend |
Cat# 117320 |
APC anti-mouse Cd11c, clone N418 |
Biolegend |
Cat# 117310 |
PE-Cy7 anti-mouse F4/80, clone BM8 |
Biolegend |
Cat# 123114 |
APC-Cy7 anti-mouse Ly6C, clone HK1.4 |
Biolegend |
Cat# 128026 |
BV421 anti-mouse I-A/I-E, clone M5/114.15.2 |
Biolegend |
Cat# 107632 |
BV650 anti-mouse H-2Kb/H-2Db, Clone 28-8-6 |
BD Biosciences |
Cat# 745287 |
APC anti-mouse CD115, clone AFS98 |
eBioscience |
Cat# 17-1152-82 |
APC/Fire750 anti-mouse H-2Kb/H-2Db
|
Biolegend |
Cat# 114618 |
Purified anti-mouse CD16/32, clone 93 |
Biolegend |
Cat# 101302 |
Mouse Monoclonal anti-IL-18, clone 74 |
MBL |
Cat# D047-3;RRID:AB_592016 |
Mouse Monoclonal anti-IL-18, Biotin conjugated |
MBL |
Cat# D048-6;RRID:AB_592021 |
Chemicals, peptides, and recombinant proteins |
Fetal bovine serum |
Thermo Scientific |
Cat# 16140071 |
Penicillin and Streptomycin |
Gibco |
Cat# 15140122 |
DPBS |
Corning |
Cat# 21-031-CV |
RPMI |
Cytiva Hyclone, Fisher Scientific |
Cat# SH30027FS |
DMEM |
Corning |
Cat# 10-013-CV |
Opti-MEM |
Gibco |
Cat# 31985088 |
LPS |
Invivogen |
Cat# Tlrl-3pelps |
Pam3csk4 |
Invivogen |
Cat# Tlrl-pms |
MSU |
Invivogen |
Cat# Tlrl-msu |
Silica/NanoSiO2 |
Invivogen |
Cat# Tlrl-SiO-2 |
Nigericin |
Invivogen |
Cat# Tlrl-nig |
ATP |
Sigma-Aldrich |
Cat# A6419 |
CPPD |
Invivogen |
Cat# Tlrl-cppd |
Flagellin |
Invivogen |
Cat# Tlrl-epstfla-5 |
Lipofectamine |
Thermo Scientific |
Cat# 11668019 |
DOTAP |
Roche |
Cat# 11202375001 |
PMA |
Invitrogen |
Cat# J63916.MCR |
Protease inhibitor |
Pierce |
Cat# A329631 |
Trizol |
Invitrogen |
Cat# 15596026 |
Protein agarose A/G beads |
Santa Cruz |
Cat# SC2003 |
Super Signal West Femto |
Thermo Scientific |
Cat# 34096 |
Staurosporin |
Sigma-Aldrich |
Cat# S6942 |
WGP dispersible |
Invivogen |
Cat# Tlrl-wgp |
Ac-YVAD-AFC |
Enzo Life Science |
Cat# ALX-260-108-M005 |
Ac-DEVD-AFC |
Enzo Life Science |
Cat# ALX-260-032-M001 |
Ac-IETD-AFC |
Enzo Life Science |
Cat# ALX-260-110-M005 |
Ac-LEHD-AFC |
Enzo Life science |
Cat# ALX-260-116-M005 |
Biotin-VAD-FMK |
Santa Cruz |
Cat# Sc311290 |
Biotin-YVAD-CMK |
Anaspec |
Cat# AS-60841 |
Neutravidin |
Pierce |
Cat# 29200 |
FSL-1 |
Invivogen |
Cat# tlrl-fsl |
Bacillus anthracis lethal factor |
List labs |
Cat# 104 |
Protective antigen |
List labs |
Cat# 104 |
Poly(dA:dT) |
Invivogen |
Cat# Tlrl-patn |
Brilliant Stain Buffer |
BD Horizon |
Cat# 566349 |
eBioscience™ Fixable Viability Dye eFluor™ 506 |
ThermoFisher |
Cat# 65-0866-14 |
MACS Buffer |
Miltenyi |
Cat# 130-091-221 |
FcBlock |
BD Biosciences |
Cat# 553141 |
Cytofix/Cytoperm |
BD Biosciences |
Cat# 554714 |
Cytotox Red |
Essen Bioscience |
Cat# 4632 |
XenoLight Rediject Inflammation probe |
Perkin Elmer |
Cat# 760536 |
Luminol sodium salt |
Sigma Aldrich |
Cat# A4685 |
FLICA Caspase-1 inhibitor II Biotinylated |
Anaspec |
Cat# AS-60841 |
DSS Disuccinimidyl suberate |
Thermo Scientific |
Cat# A39267 |
recombinant murine IFN-γ |
Peprotech |
Cat# 315-05 |
MISSION ExpressMag magnetic beads |
Millipore-Sigma |
Cat# SHM03 |
Puromycin |
Santa Cruz Biotechnology |
Cat# 53-79-2 |
Critical commercial assays |
IL-1β ELISA (human) |
Invitrogen |
Cat# 88-7261-22 |
IL-1β ELISA (mouse) |
Invitrogen |
Cat# 88-7013-22 |
IL-18 ELISA (human) |
R&D Systems |
Cat# DY318-05 |
TNF ELISA (human) |
Invitrogen |
Cat# 887346-76 |
TNF ELISA (mouse) |
Invitrogen |
Cat# 88-7324-88 |
TNF ELISA (human) |
R&D Systems |
Cat# DY410 |
TNF ELISA (mouse) |
R&D Systems |
Cat# DY210 |
CXCL1 ELISA (mouse) |
R&D Systems |
Cat# DY453-05 |
CXCL2 ELISA (mouse) |
R&D Systems |
Cat# DY452-05 |
Caspase-1 ELISA (mouse) |
Adipogen |
Cat# AG-45B-0002-KI01 |
NLRP3 ELISA (mouse) |
LSBio |
Cat# LS-F17336-1 |
GFP Taqman assay |
Invitrogen |
Cat# Mr04329676_mr |
CARD16 Taqman assay |
Invitrogen |
Cat# Hs03008439_s1 |
CARD17 Taqman assay |
Invitrogen |
Cat# Hs01910190_s1 |
CARD18 Taqman assay |
Invitrogen |
Cat# Hs01043258_m1 |
MycoAlert Mycoplasma Detection Kit |
Lonza |
Cat# LT07 |
LDH Cytotoxicity Assay (CyQUANT) |
Invitrogen |
Cat# C203021 |
Verso cDNA Synthesis Kit |
Thermo |
Cat# 75650200RXN |
Duolink Proximity Ligation Assay |
Millipore Sigma |
Cat# DUO92101-1KT |
Deposited data |
Affymetrix Human Genome U133 Plus 2.0 Array (HG-U133_Plus_2) |
(Lauwerys et al., 2015;43 Nzeusseu Toukap et al., 2007)44
|
GEO: GSE36700
|
original, unprocessed western blot images |
this manuscript |
https://doi.org/10.17632/gz8rc92m38.1
|
Experimental models: Cell lines |
THP-1 |
American Type Culture Collection |
Cat# TIB-202 |
HEK293 |
American Type Culture Collection |
Cat# CRL-3216 |
HEK293 lenti-X |
Takara Bio |
Cat# 632180 |
L292 |
American Type Culture Collection |
Cat# CCL-1 |
CASP1KO THP-1 |
(Chu et al., 2018)92
|
N/A |
ASCKD THP-1 |
(Bryan et al., 2009)93
|
N/A |
Ctrl GFP THP-1 |
this manuscript |
N/A |
GFP-CARD16 THP-1 |
this manuscript |
N/A |
GFP-CARD17 THP-1 |
this manuscript |
N/A |
GFP-CARD18 THP-1 |
this manuscript |
N/A |
ASCKO THP-1 |
Invivogen |
thp-koascz |
Experimental models: Organisms/strains |
Mouse: C57BL/6 |
The Jackson Laboratory, bred in house |
JAX#:00066; RRID:IMSR_JAX:000664 |
Mouse: B6.Tg(CD68-CARD16) |
this manuscript |
N/A |
Mouse: B6.Tg(CD68-CARD17) |
this manuscript |
N/A |
Mouse: B6.Tg(CD68-CARD18) |
this manuscript |
N/A |
Mouse: Casp1−/−
|
V. M. Dixit (Kayagaki et al., 20159) |
N/A |
Oligonucleotides |
Please see Table S1
|
|
N/A |
Recombinant DNA |
pCAT-Basic-CARD16 |
this manuscript |
N/A |
pCAT-Basic-CARD17 |
this manuscript |
N/A |
pCAT-Basic-CARD18 |
this manuscript |
N/A |
pLex-GFP-CARD16 |
this manuscript |
N/A |
pLex-GFP-CARD17 |
this manuscript |
N/A |
pLex-GFP-CARD18 |
this manuscript |
N/A |
pCDNA3-caspase-1 CARD mNeonGreen |
this manuscript |
N/A |
pCDNA3-caspase-1 CARD mScarlet-I |
this manuscript |
N/A |
pCDNA3- mNeonGreen-mScarlet-I |
this manuscript |
N/A |
pMD2.G |
Addgene |
Cat# 12259; RRID:Addgene_12259 |
psPAX2 |
Addgene |
Cat# 12260; RRID:Addgene_12260 |
lentiCRISPRv1 |
Addgene |
Cat# 49535 |
Software and algorithms |
FlowJo v10 |
BD Biosciences |
N/A |
Cytek acquisition software |
Cytek |
N/A |
SkanIt |
Thermo |
N/A |
IncuCyte Base Analysis Software |
Sartorius |
N/A |
NIS-Elements AR with ai |
Nikon |
N/A |
Fiji (Image J) |
Schindelin et al., 201294
|
N/A |
Living Image software 4.7.3 |
Perkin Elmer |
N/A |