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. Author manuscript; available in PMC: 2023 May 2.
Published in final edited form as: Cell Rep. 2023 Mar 16;42(3):112265. doi: 10.1016/j.celrep.2023.112265

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit monoclonal anti-caspase-1_p20, clone D7F10 Cell Signaling Technology Cat# 3866; RRID:AB_2069051
Rabbit monoclonal cleaved anti-caspase-1, clone D57A2 Cell Signaling Technology Cat# 4199; RRID: AB_1903916
Mouse monoclonal cleaved anti-caspase-1, clone casper-1 AdipoGen Cat# AG-20B0042; RRID: AB_2490248
Mouse monoclonal anti-caspase-1, clone 1021323 R&D Systems Cat# MAB62152
Mouse monoclonal anti-caspase-1 (p10), clone casper-2 AdipoGen Cat# AG-20B-0044-C100; RRID:AB_2490253
Rabbit monoclonal cleaved anti-gasderminD Abcam Cat# ab209845; RRID:AB_2783550
Rabbit monoclonal cleaved anti-gasderminD, Clone E7H9G Cell Signaling Technology Cat# 36425; RRID:AB_2799099
Rabbit monoclonal anti-gasderminD, clone L60 Cell Signaling Technology Cat# 93709; RRID:AB_2800210
Mouse monoclonal anti-NLRP3, clone Cryo-2 AdipoGen Cat# AG20B0014; RRID:AB_2885199
Rabbit polyclonal anti-NLRP3, clone D4D8T Cell Signaling Technology Cat# 15101; RRID:AB_2722591
Mouse monoclonal anti-GFP, clone B-2 Santa Cruz Cat# SC9996; RRID:AB_627695
Rabbit monoclonal anti-GFP, clone D5.1 Cell Signaling Technology Cat# 2956; RRID:AB_1196615
Rabbit polyclonal anti-ASC, clone AL177 AdipoGen Cat# AG25B0006; RRID:AB_2490440
Mouse monoclonal anti-β-tubulin, clone DSHB, AA12.1 Developmental Studies Hybridoma Bank Cat# AA12.1
Rabbit polyclonal anti-IL-1β Santa Cruz Cat# SC7884; RRID:AB_2124476
Rabbit monoclonal cleaved anti-IL-1b, clone D3A3Z Cell Signaling Technology Cat# 83186; RRID: AB_2800010
Rabbit monoclonal anti-IL-1β Cell Signaling Technology Cat# 52719; RRID:AB_2799421
Mouse monoclonal anti-IL-1β Cell Signaling Technology Cat# 12242; RRID:AB_2715503
HRP conjugated secondary anti-rabbit Invitrogen Cat# 31460
HRP conjugated secondary anti-mouse Invitrogen Cat# 32430
HRP conjugated secondary anti-goat Invitrogen Cat# A15999
Rabbit monoclonal cleaved anti- caspase-3, clone 5A1E Cell Signaling Technology Cat# 9664; RRID:AB_2070042
Rabbit monoclonal anti-caspase-3, clone D3R6Y Cell Signaling Technology Cat# 14220; RRID:AB_2798429
Anti-Caspase-8 Cell Signaling Technology Cat# 4927; RRID:AB_2068301
Rabbit monoclonal cleaved caspase-8, clone D5B2 Cell signaling Technology Cat# 8592; RRID:AB_10891784
Anti-caspase-9 Cell Signaling Technology Cat# 9504; RRID:AB_2275591
Anti-cleaved caspase-9 Cell signaling Technology Cat# 9509; RRID:AB_2073476
Mouse monoclonal cleaved anti-PARP Cell signaling Technology Cat# 9548; RRID:AB_2160592
cleaved anti-Caspase-3 (Asp175) Cell Signaling Technology Cat# 9661; RRID:AB_2341188
Rabbit monoclonal cleaved PARP (Asp214) Cell Signaling Technology Cat#5625; RRID:AB_10699459
Anti-mouse CD45.2-BV570, clone 104 Biolegend Cat# 109833
Anti-mouse Ly6G-BV785, clone 1A8 Biolegend Cat#127645
Anti-mouse CD3e-BV785, clone 145-2C11 Biolegend Cat# 100355
Anti-mouse CD19-BV785, clone 6D5 Biolegend Cat# 115543
Anti-mouse NK-1.1-BV785, clone PK136 Biolegend Cat# 108749
PE-CF594 Rat anti-mouse SiglecF, clone E50-2440 BD Biosciences Cat# 562757
BB700 Rat Anti-Cd11b, clone M1/70 BD Biosciences Cat# 566417
Alexa Fluor 700 anti-mouse Cd11c, clone N418 Biolegend Cat# 117320
APC anti-mouse Cd11c, clone N418 Biolegend Cat# 117310
PE-Cy7 anti-mouse F4/80, clone BM8 Biolegend Cat# 123114
APC-Cy7 anti-mouse Ly6C, clone HK1.4 Biolegend Cat# 128026
BV421 anti-mouse I-A/I-E, clone M5/114.15.2 Biolegend Cat# 107632
BV650 anti-mouse H-2Kb/H-2Db, Clone 28-8-6 BD Biosciences Cat# 745287
APC anti-mouse CD115, clone AFS98 eBioscience Cat# 17-1152-82
APC/Fire750 anti-mouse H-2Kb/H-2Db Biolegend Cat# 114618
Purified anti-mouse CD16/32, clone 93 Biolegend Cat# 101302
Mouse Monoclonal anti-IL-18, clone 74 MBL Cat# D047-3;RRID:AB_592016
Mouse Monoclonal anti-IL-18, Biotin conjugated MBL Cat# D048-6;RRID:AB_592021
Chemicals, peptides, and recombinant proteins
Fetal bovine serum Thermo Scientific Cat# 16140071
Penicillin and Streptomycin Gibco Cat# 15140122
DPBS Corning Cat# 21-031-CV
RPMI Cytiva Hyclone, Fisher Scientific Cat# SH30027FS
DMEM Corning Cat# 10-013-CV
Opti-MEM Gibco Cat# 31985088
LPS Invivogen Cat# Tlrl-3pelps
Pam3csk4 Invivogen Cat# Tlrl-pms
MSU Invivogen Cat# Tlrl-msu
Silica/NanoSiO2 Invivogen Cat# Tlrl-SiO-2
Nigericin Invivogen Cat# Tlrl-nig
ATP Sigma-Aldrich Cat# A6419
CPPD Invivogen Cat# Tlrl-cppd
Flagellin Invivogen Cat# Tlrl-epstfla-5
Lipofectamine Thermo Scientific Cat# 11668019
DOTAP Roche Cat# 11202375001
PMA Invitrogen Cat# J63916.MCR
Protease inhibitor Pierce Cat# A329631
Trizol Invitrogen Cat# 15596026
Protein agarose A/G beads Santa Cruz Cat# SC2003
Super Signal West Femto Thermo Scientific Cat# 34096
Staurosporin Sigma-Aldrich Cat# S6942
WGP dispersible Invivogen Cat# Tlrl-wgp
Ac-YVAD-AFC Enzo Life Science Cat# ALX-260-108-M005
Ac-DEVD-AFC Enzo Life Science Cat# ALX-260-032-M001
Ac-IETD-AFC Enzo Life Science Cat# ALX-260-110-M005
Ac-LEHD-AFC Enzo Life science Cat# ALX-260-116-M005
Biotin-VAD-FMK Santa Cruz Cat# Sc311290
Biotin-YVAD-CMK Anaspec Cat# AS-60841
Neutravidin Pierce Cat# 29200
FSL-1 Invivogen Cat# tlrl-fsl
Bacillus anthracis lethal factor List labs Cat# 104
Protective antigen List labs Cat# 104
Poly(dA:dT) Invivogen Cat# Tlrl-patn
Brilliant Stain Buffer BD Horizon Cat# 566349
eBioscience Fixable Viability Dye eFluor 506 ThermoFisher Cat# 65-0866-14
MACS Buffer Miltenyi Cat# 130-091-221
FcBlock BD Biosciences Cat# 553141
Cytofix/Cytoperm BD Biosciences Cat# 554714
Cytotox Red Essen Bioscience Cat# 4632
XenoLight Rediject Inflammation probe Perkin Elmer Cat# 760536
Luminol sodium salt Sigma Aldrich Cat# A4685
FLICA Caspase-1 inhibitor II Biotinylated Anaspec Cat# AS-60841
DSS Disuccinimidyl suberate Thermo Scientific Cat# A39267
recombinant murine IFN-γ Peprotech Cat# 315-05
MISSION ExpressMag magnetic beads Millipore-Sigma Cat# SHM03
Puromycin Santa Cruz Biotechnology Cat# 53-79-2
Critical commercial assays
IL-1β ELISA (human) Invitrogen Cat# 88-7261-22
IL-1β ELISA (mouse) Invitrogen Cat# 88-7013-22
IL-18 ELISA (human) R&D Systems Cat# DY318-05
TNF ELISA (human) Invitrogen Cat# 887346-76
TNF ELISA (mouse) Invitrogen Cat# 88-7324-88
TNF ELISA (human) R&D Systems Cat# DY410
TNF ELISA (mouse) R&D Systems Cat# DY210
CXCL1 ELISA (mouse) R&D Systems Cat# DY453-05
CXCL2 ELISA (mouse) R&D Systems Cat# DY452-05
Caspase-1 ELISA (mouse) Adipogen Cat# AG-45B-0002-KI01
NLRP3 ELISA (mouse) LSBio Cat# LS-F17336-1
GFP Taqman assay Invitrogen Cat# Mr04329676_mr
CARD16 Taqman assay Invitrogen Cat# Hs03008439_s1
CARD17 Taqman assay Invitrogen Cat# Hs01910190_s1
CARD18 Taqman assay Invitrogen Cat# Hs01043258_m1
MycoAlert Mycoplasma Detection Kit Lonza Cat# LT07
LDH Cytotoxicity Assay (CyQUANT) Invitrogen Cat# C203021
Verso cDNA Synthesis Kit Thermo Cat# 75650200RXN
Duolink Proximity Ligation Assay Millipore Sigma Cat# DUO92101-1KT
Deposited data
Affymetrix Human Genome U133 Plus 2.0 Array (HG-U133_Plus_2) (Lauwerys et al., 2015;43 Nzeusseu Toukap et al., 2007)44 GEO: GSE36700
original, unprocessed western blot images this manuscript https://doi.org/10.17632/gz8rc92m38.1
Experimental models: Cell lines
THP-1 American Type Culture Collection Cat# TIB-202
HEK293 American Type Culture Collection Cat# CRL-3216
HEK293 lenti-X Takara Bio Cat# 632180
L292 American Type Culture Collection Cat# CCL-1
CASP1KO THP-1 (Chu et al., 2018)92 N/A
ASCKD THP-1 (Bryan et al., 2009)93 N/A
Ctrl GFP THP-1 this manuscript N/A
GFP-CARD16 THP-1 this manuscript N/A
GFP-CARD17 THP-1 this manuscript N/A
GFP-CARD18 THP-1 this manuscript N/A
ASCKO THP-1 Invivogen thp-koascz
Experimental models: Organisms/strains
Mouse: C57BL/6 The Jackson Laboratory, bred in house JAX#:00066; RRID:IMSR_JAX:000664
Mouse: B6.Tg(CD68-CARD16) this manuscript N/A
Mouse: B6.Tg(CD68-CARD17) this manuscript N/A
Mouse: B6.Tg(CD68-CARD18) this manuscript N/A
Mouse: Casp1−/− V. M. Dixit (Kayagaki et al., 20159) N/A
Oligonucleotides
Please see Table S1 N/A
Recombinant DNA
pCAT-Basic-CARD16 this manuscript N/A
pCAT-Basic-CARD17 this manuscript N/A
pCAT-Basic-CARD18 this manuscript N/A
pLex-GFP-CARD16 this manuscript N/A
pLex-GFP-CARD17 this manuscript N/A
pLex-GFP-CARD18 this manuscript N/A
pCDNA3-caspase-1 CARD mNeonGreen this manuscript N/A
pCDNA3-caspase-1 CARD mScarlet-I this manuscript N/A
pCDNA3- mNeonGreen-mScarlet-I this manuscript N/A
pMD2.G Addgene Cat# 12259; RRID:Addgene_12259
psPAX2 Addgene Cat# 12260; RRID:Addgene_12260
lentiCRISPRv1 Addgene Cat# 49535
Software and algorithms
FlowJo v10 BD Biosciences N/A
Cytek acquisition software Cytek N/A
SkanIt Thermo N/A
IncuCyte Base Analysis Software Sartorius N/A
NIS-Elements AR with ai Nikon N/A
Fiji (Image J) Schindelin et al., 201294 N/A
Living Image software 4.7.3 Perkin Elmer N/A