Table 2.
Quality control process.
QC level | Number of Cells/Genes before QC | Criteria | Number of Filtered out Cells/Genes | Number of Cells/Genes after QC |
---|---|---|---|---|
Cells | 17997 | With less than 1000 counts | 4266 | 13638 |
With more than 32000 counts | 5 | |||
With Mitochondrial genes fraction more than 20% | 4 | |||
With less than 450 expressed genes | 57 | |||
With Ribosomal genes fraction more than 5% | 27 | |||
Genes | 33538 | Detected in less than 20 cells | 18769 | 14769 |