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. Author manuscript; available in PMC: 2023 Oct 1.
Published in final edited form as: Nat Methods. 2023 Mar 23;20(4):559–568. doi: 10.1038/s41592-023-01799-x

Extended Data Fig. 6.

Extended Data Fig. 6.

Evaluation of DUP and INV calls in the CHM1+CHM13 benchmark. a. Upset plot depicting DUP callset overlaps of short-read and long-read callers (only sets larger than 5 events are displayed for conciseness). Overlaps that include Cue are highlighted in orange. b. Breakdown of DUP calls by consensus with long-read and other short-read callers. c. Upset plot depicting INV callset overlaps of short-read and long-read callers. d. Breakdown of INV calls by consensus with long-read and other short-read callers.