Extending Cue to long and linked read sequencing platforms. a. Image channels generated from synthetic PacBio CLR long reads and 10x Genomics linked reads, computed for an interval of the genome containing four different SVs (labeled along the -axis; the same interval is assigned to both axes). b. Precision, recall, and F1 score in DEL, DUP, and INV calling and genotyping. LinkedSV does not output SV genotypes and is omitted. c. Recall of two complex SV types (INVDUP and INVDEL) using long and linked reads.