Cryo-EM maps of CAND1-SCFFBXW7 suggest that CAND1 rolls around an SCF
(A) Cryo-EM maps show CAND1 adopts multiple conformations with its anti-neddylation domain bound, and its anti-SKP1 domain disengaged from SCFFBXW7. Four maps (a–d) adopt rolling-2 conformations, with CAND1's central arch spiraling away from rather than curling around the SCF. Two maps (a and b) adopt rolling-1 conformations, where only CAND1’s anti-neddylation domain is substantially visible in the density. Other maps show little to no CAND1.
(B) To model the conformations and trajectories of CAND1 bound to SCFFBXW7, CAND1 domains40 were docked into maps for rolling-2 conformations. The full-length CAND1 structure was docked into the density for the anti-neddylation domain in rolling-1a conformation. Alignment of the CAND1 models over the anti-neddylation domain shows twisting and turning of CAND1 HEAT repeats in the different conformations.
(C) To model the conformations and trajectories of CUL1 in CAND1-SCFFBXW7 complexes, structures CUL1 domains were docked to the maps. Alignment over CUL1’s CR2-CR3 domains shows that the CUL1 WHB, ⍺/β, and CR1 domains assume multiple relative orientations. The orientations in the crystal structure of CAND1-CUL1-RBX140 are shown for reference.
See also Figure S2.