Table 1.
Gene | Chromosome | Nucleotide change | Amino acid change | Count | Variant type | In silico | ACMG criteria | Variant class | ||
---|---|---|---|---|---|---|---|---|---|---|
PolyPhen-2 | SIFT score | CADD score | ||||||||
LDLR | 19 | c.1221_1222delCGinsT | p.Glu408ArgFs∗5 | 1 | Nonsense | NA | NA | NA | PVS1 + PM2 | PM |
APOB | 2 | c.10591A>G | p.Lys3531Glu | 1 | Missense | 0.574 | 0 | 19.36 | PM1 + PM2 + PM6 | VUS |
CADD score, combined annotation-dependent depletion score; ACMG criteria, American college of medical genetics criteria; PM, pathogenic mutation; VUS, variant of uncertain significance.