Table 1.
DNA oligomers used to construct duplexes for guanine exchange assays and binding experiments
| Name | Oligomers used | Sequence |
|---|---|---|
| 80a | pUC19 169–248 F | 5′-TAC TGA GAG TGC ACC ATA TGC GGT GTG AAA TAC CGC ACA GAT GCG TAA GGA GAA AAT ACC GCA TCA GGC GCC ATT CGC CA-3′ |
| pUC19 169–248 R | 5′-TGG CGA ATG GCG CCT GAT GCG GTA TTT TCT CCT TAC GCA TCT GTG CGG TAT TTC ACA CCG CAT ATG GTG CAC TCT CAG TA-3′ | |
| 80b | pUC19 249–328 F | 5′-TTC AGG CTG CGC AAC TGT TGG GAA GGG CGA TCG GTG CGG GCC TCT TCG CTA TTA CGC CAG CTG GCG AAA GGG GGA TGT GC-3′ |
| pUC19 249–328 R | 5′-GCA CAT CCC CCT TTC GCC AGC TGG CGT AAT AGC GAA GAG GCC CGC ACC GAT CGC CCT TCC CAA CAG TTG CGC AGC CTG AA-3′ | |
| 81c | pUC19 329–409 F | 5′-TGC AAG GCG ATT AAG TTG GGT AAC GCC AGG GTT TTC CCA GTC ACG ACG TTG TAA AAC GAC GGC CAG TGA ATT CGA GCT CGG-3′ |
| pUC19 329–409 R | 5′-CCG AGC TCG AAT TCA CTG GCC GTC GTT TTA CAA CGT CGT GAC TGG GAA AAC CCT GGC GTT ACC CAA CTT AAT CGC CTT GCA-3′ | |
| 40a | pUC19 249–288 F | 5′-TTC AGG CTG CGC AAC TGT TGG GAA GGG CGA TCG GTG CGG G-3′ |
| pUC19 249–288 R | 5′-CCC GCA CCG ATC GCC CTT CCC AAC AGT TGC GCA GCC TGA A-3′ | |
| 40b | pUC19 289–328 F | 5′-CCT CTT CGC TAT TAC GCC AGC TGG CGA AAA GGG GAT GTG C-3′ |
| pUC19 289–328 R | 5′-GCA CAT CCC CTT TTC GCC AGC TGG CGT AAT AGC GAA GAG G-3′ | |
| 18T | 40bF18T | 5′-CCT CTT CGC TAT TAC GCT AGC TGG CGA AAA GGG GAT GTG C-3′ |
| 40bF18T comp | 5′-GCA CAT CCC CTT TTC GCC AGC TAG CGT AAT AGC GAA GAG G-3′ | |
| 20A | 40bF20A | 5′-CCT CTT CGC TAT TAC GCC AAC TGG CGA AAA GGG GAT GTG C-3′ |
| 40bF20A comp | 5′-GCA CAT CCC CTT TTC GCC AGT TGG CGT AAT AGC GAA GAG G-3′ | |
| 21T | 40bF21T | 5′-CCT CTT CGC TAT TAC GCC AGT TGG CGA AAA GGG GAT GTG C-3′ |
| 40bF21T comp | 5′-GCA CAT CCC CTT TTC GCC AAC TGG CGT AAT AGC GAA GAG G-3′ | |
| 23A | 40bF23A | 5′-CCT CTT CGC TAT TAC GCC AGC TAG CGA AAA GGG GAT GTG C-3′ |
| 40bF23A comp | 5′-GCA CAT CCC CTT TTC GCT AGC TGG CGT AAT AGC GAA GAG G-3′ | |
| 28bp | 28bpDuplexF | 5′-GGG GTT TTC GCC AGC TGG CGT TTT GGG G-3′ |
| 28bpDuplexR | 5′-CCC CAA AAC GCC AGC TGG CGA AAA CCC C-3′ |