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. 2023 Mar 17;51(8):3836–3854. doi: 10.1093/nar/gkad141

Table 1.

DNA oligomers used to construct duplexes for guanine exchange assays and binding experiments

Name Oligomers used Sequence
80a pUC19 169–248 F 5′-TAC TGA GAG TGC ACC ATA TGC GGT GTG AAA TAC CGC ACA GAT GCG TAA GGA GAA AAT ACC GCA TCA GGC GCC ATT CGC CA-3′
pUC19 169–248 R 5′-TGG CGA ATG GCG CCT GAT GCG GTA TTT TCT CCT TAC GCA TCT GTG CGG TAT TTC ACA CCG CAT ATG GTG CAC TCT CAG TA-3′
80b pUC19 249–328 F 5′-TTC AGG CTG CGC AAC TGT TGG GAA GGG CGA TCG GTG CGG GCC TCT TCG CTA TTA CGC CAG CTG GCG AAA GGG GGA TGT GC-3′
pUC19 249–328 R 5′-GCA CAT CCC CCT TTC GCC AGC TGG CGT AAT AGC GAA GAG GCC CGC ACC GAT CGC CCT TCC CAA CAG TTG CGC AGC CTG AA-3′
81c pUC19 329–409 F 5′-TGC AAG GCG ATT AAG TTG GGT AAC GCC AGG GTT TTC CCA GTC ACG ACG TTG TAA AAC GAC GGC CAG TGA ATT CGA GCT CGG-3′
pUC19 329–409 R 5′-CCG AGC TCG AAT TCA CTG GCC GTC GTT TTA CAA CGT CGT GAC TGG GAA AAC CCT GGC GTT ACC CAA CTT AAT CGC CTT GCA-3′
40a pUC19 249–288 F 5′-TTC AGG CTG CGC AAC TGT TGG GAA GGG CGA TCG GTG CGG G-3′
pUC19 249–288 R 5′-CCC GCA CCG ATC GCC CTT CCC AAC AGT TGC GCA GCC TGA A-3′
40b pUC19 289–328 F 5′-CCT CTT CGC TAT TAC GCC AGC TGG CGA AAA GGG GAT GTG C-3′
pUC19 289–328 R 5′-GCA CAT CCC CTT TTC GCC AGC TGG CGT AAT AGC GAA GAG G-3′
18T 40bF18T 5′-CCT CTT CGC TAT TAC GCT AGC TGG CGA AAA GGG GAT GTG C-3′
40bF18T comp 5′-GCA CAT CCC CTT TTC GCC AGC TAG CGT AAT AGC GAA GAG G-3′
20A 40bF20A 5′-CCT CTT CGC TAT TAC GCC AAC TGG CGA AAA GGG GAT GTG C-3′
40bF20A comp 5′-GCA CAT CCC CTT TTC GCC AGT TGG CGT AAT AGC GAA GAG G-3′
21T 40bF21T 5′-CCT CTT CGC TAT TAC GCC AGT TGG CGA AAA GGG GAT GTG C-3′
40bF21T comp 5′-GCA CAT CCC CTT TTC GCC AAC TGG CGT AAT AGC GAA GAG G-3′
23A 40bF23A 5′-CCT CTT CGC TAT TAC GCC AGC TAG CGA AAA GGG GAT GTG C-3′
40bF23A comp 5′-GCA CAT CCC CTT TTC GCT AGC TGG CGT AAT AGC GAA GAG G-3′
28bp 28bpDuplexF 5′-GGG GTT TTC GCC AGC TGG CGT TTT GGG G-3′
28bpDuplexR 5′-CCC CAA AAC GCC AGC TGG CGA AAA CCC C-3′