Table 2.
Group | Mean | CV | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Plastome | LSC | SSC | IR | Plastome | LSC | SSC | IR | |||
Sequence length | Whole | 152,741 ± 301 | 84,402 ± 277 | 17,016 ± 69 | 25,662 ± 247 | 0.20% | 0.33% | 0.41% | 0.99% | |
ONAE | 152,227 ± 1 | 84,261 ± 0 | 16,679 ± 0 | 25,644 ± 1 | 0 | 0 | 0 | 0 | ||
MOUT_WILD | 152,849 ± 441 | 84,330 ± 392 | 17,046 ± 22 | 25,736 ± 373 | 0.29% | 0.47% | 0.13% | 1.46% | ||
MOUT_CULT | 152,688 ± 290 | 84,530 ± 367 | 17,050 ± 12 | 25,554 ± 283 | 0.19% | 0.44% | 0.07% | 1.14% | ||
PAEO_WILD | 152,709 ± 60 | 84,383 ± 46 | 17,014 ± 20 | 25,656 ± 11 | 0.04% | 0.06% | 0.12% | 0.04% | ||
PAEO_CULT | 152,822 ± 236 | 84,400 ± 31 | 16,978 ± 23 | 25,722 ± 132 | 0.15% | 0.04% | 0.13% | 0.51% | ||
GC content | Whole | 38.4 ± 0.05% | 36.7 ± 0.05% | 32.7 ± 0.09% | 43.09 ± 0.07% | 0.13% | 0.13% | 0.28% | 0.17% | |
ONAE | 38.55 ± 0% | 36.83 ± 0% | 33.02 ± 0% | 43.16 ± 0% | 0 | 0 | 0 | 0 | ||
MOUT_WILD | 38.37 ± 0.04% | 36.68 ± 0.04% | 32.64 ± 0.07% | 43.05 ± 0.11% | 0.10% | 0.12% | 0.22% | 0.26% | ||
MOUT_CULT | 38.36 ± 0.04% | 36.66 ± 0.03% | 32.65 ± 0.06% | 43.09 ± 0.03% | 0.09% | 0.10% | 0.18% | 0.07% | ||
PAEO_WILD | 38.43 ± 0.01% | 36.72 ± 0.01% | 32.75 ± 0.04% | 43.13 ± 0.02% | 0.02% | 0.03% | 0.11% | 0.05% | ||
PAEO_CULT | 38.43 ± 0.01% | 36.74 ± 0.01% | 32.72 ± 0.01% | 43.1 ± 0.05% | 0.02% | 0.03% | 0.04% | 0.11% |
CV, coefficient of variation; IR, inverted repeat sequence; LSC, large single-copy sequence; SSC, small single-copy sequence