Table 3.
Genes annotated in Paeonia plastomes
| Category | Gene functions | Names of genes |
|---|---|---|
| Self-replication | DNA-dependent RNA polymerase | rpoA, B, C1, C2 |
| Self-replication | Large subunit of ribosomal proteins | rpl2, 14, 16, 20, 22, 23, 33, 36 |
| Self-replication | rRNA genes | rrn16, rrn23, rrn4.5, rrn5 |
| Self-replication | Small subunit of ribosomal proteins | rps11, rps12, rps14, rps15, rps16, rps18, rps19, rps2, rps3, rps4, rps7, rps8 |
| Self-replication | tRNA genes | trnA-UGC, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC, trnG-UCC, trnH-GUG, trnI-CAU, trnI-GAU, trnK-UUU, trnL-CAA, trnL-UAA, trnL-UAG, trnM-CAU, trnN-GUU, trnP-GGG, trnQ-UUG, trnR-ACG, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC, trnV-UAC, trnW-CCA, trnY-GUA |
| Photosynthesis | ATP synthase | atpA, B, E, F, H, I |
| Photosynthesis | Cytochrome b6/f complex | petA, B, D, G, L, N |
| Photosynthesis | NADH oxidoreductase | ndhA, B, C, D, E, F, G, H, I, J, K |
| Photosynthesis | photosystem assembly factor | pafI, pafII |
| Photosynthesis | Photosystem I | psaA, B, C, I, J |
| Photosynthesis | Photosystem II | psbA, B, C, D, E, F, H, I, J, K, L, M, T, Z |
| Photosynthesis | Rubisco | rbcL |
| Other genes | c-Type cytochrome synthesis gene | ccsA |
| Other genes | Conserved open reading frames | ycf1, 2 |
| Other genes | Envelope membrane protein | cemA |
| Other genes | Maturase | matK |
| Other genes | Protease | clpP1 |
| Other genes | Subunit acetyl-CoA-carboxylase | accD |