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. Author manuscript; available in PMC: 2023 May 9.
Published in final edited form as: J Proteome Res. 2023 Jan 17;22(2):615–624. doi: 10.1021/acs.jproteome.2c00624

Figure 1.

Figure 1.

Overview of the software tools and data formats of the TPP. Tools are grouped into broad categories for which there are often alternatives, and underpinned by a set of XML open formats. Most of the depicted tools come bundled with the TPP, but a few such Mascot are external tools whose output can be used by the TPP.