Table 3.
Molecular docking simulation of agomelatine to BSA results.
| Mode | Affinity (kcal/mol) | RMSD (lower bond) | RMSD (upper bond) | Amino acid residues |
|---|---|---|---|---|
| 1 | −8.0 | 0.000 | 0.000 | Tyr-137, Tyr-160 |
| 2 | −8.0 | 2.366 | 4.355 | Arg-185 |
| 3 | −7.5 | 24.450 | 26.418 | Arg-185 |
| 4 | −7.4 | 4.821 | 6.194 | Arg-185 |
| 5 | −7.4 | 2.672 | 4.920 | Tyr-160 |
| 6 | −7.1 | 2.849 | 4.113 | Lys-116 |
| 7 | −7.1 | 23.682 | 25.774 | Tyr-160 |
| 8 | −7.0 | 2.951 | 7.416 | Lys-136 |
| 9 | −6.9 | 23.207 | 25.530 | Asp-118 |
Arg, arginine; Asp, aspartic acid; Lys, lysine; RMSD, root-mean-square deviations of atomic positions; Tyr, tyrosine.