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. 2023 Apr 25;14:1161674. doi: 10.3389/fmicb.2023.1161674

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Copyright © 2023 Schaeffer, Desdouits, Besnard and Le Guyader.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic analysis of HEV-3 subtype f subclusters using full genomes sequences identified in this study. The three complete genomes detected in this study (written in red) were aligned with reference sequences of subtype HEV-3f-A1 (red lines), HEV-3f-A2 (blue lines) and HEV-3f-B (green lines; Munoz-Chimeno et al., 2022). Sequences of animal origin are identified with an asterisk. The tree was constructed using IQtree with the GTR + F + I + G4 substitution model with ultrafast bootstrap (bootstrap = 1,000) analysis, boostrap values greater than 70% are shown. Rooted tree was drawn using FigTree.