Table 4. PISA analysis of acarbose (ACR) structures (hydrogen bonds).
The distance cutoff for hydrogen bonds used here is 3.2 Å. For both structures chain A was used in the comparison (GtfC, PDB entry 3aib; GtfB, PDB entry 8fjc).
| GtfC | GtfB | ||||||
|---|---|---|---|---|---|---|---|
| Residue | Atom | ACR atom | Distance (Å) | Distance (Å) | ACR atom | Atom | Residue |
| Arg475 | NH2 | O2A | 3.05 | 3.05 | O2A | NH2 | Arg449 |
| Asp477 | OD2 | O6A | 3.23 | 2.83 | O6A | OD2 | Asp451 |
| Asn481 | ND2 | O2B | 2.50 | 3.02 | O2B | OD1 | Asn455 |
| Glu515 | OE2 | N4B | 3.13 | 2.80 | O3B | OE1 | Glu489 |
| 2.39 | O1D | ND2 | Asn511 | ||||
| Arg540 | NH2 | O1D | 3.03 | 3.17 | O6D | NH2 | Arg514 |
| Arg540 | NH1 | O1D | 3.01 | ||||
| His587 | NE2 | O3A | 2.28 | 2.83 | O3A | NE2 | His561 |
| 2.80 | O2A | NE2 | His561 | ||||
| Asp588 | OD2 | N4B | 3.19 | 3.09 | N4B | OD2 | Asp562 |
| 2.83 | O2A | OD2 | Asp562 | ||||
| 2.67 | O4A | OD2 | Asp883 | ||||
| 2.77 | O6A | NE2 | Gln934 | ||||