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. 2023 Apr 25;12:e88080. doi: 10.7554/eLife.88080

Table 3. Gene sets used for GSEA.

Further details can be found by searching for the Standard Gene Set name at http://www.gsea-msigdb.org/gsea/msigdb/mouse/genesets.jsp.

Gene Set name (Standard) Systematic Name Gene set name (shown in Figure 7C)
REACTOME_GLUCONEOGENESIS MM15392 GLUCONEOGENESIS
HALLMARK_OXIDATIVE_PHOSPHORYLATION MM3893 OXIDATIVE_PHOSPHORYLATION
REACTOME_CITRIC_ACID_CYCLE_TCA_CYCLE MM15407 CITRIC_ACID_CYCLE_TCA_CYCLE
HALLMARK_GLYCOLYSIS MM3894 GLYCOLYSIS
REACTOME_MITOCHONDRIAL_FATTY_ACID_BETA_OXIDATION MM15462 FATTY_ACID_BETA_OXIDATION
WP_FATTY_ACID_BIOSYNTHESIS MM15885 FATTY_ACID_BIOSYNTHESIS
HALLMARK_ESTROGEN_RESPONSE_EARLY MM3872 ESTROGEN_RESPONSE_EARLY
HALLMARK_ESTROGEN_RESPONSE_LATE MM3873 ESTROGEN_RESPONSE_LATE