Table 3. Gene sets used for GSEA.
Further details can be found by searching for the Standard Gene Set name at http://www.gsea-msigdb.org/gsea/msigdb/mouse/genesets.jsp.
| Gene Set name (Standard) | Systematic Name | Gene set name (shown in Figure 7C) |
|---|---|---|
| REACTOME_GLUCONEOGENESIS | MM15392 | GLUCONEOGENESIS |
| HALLMARK_OXIDATIVE_PHOSPHORYLATION | MM3893 | OXIDATIVE_PHOSPHORYLATION |
| REACTOME_CITRIC_ACID_CYCLE_TCA_CYCLE | MM15407 | CITRIC_ACID_CYCLE_TCA_CYCLE |
| HALLMARK_GLYCOLYSIS | MM3894 | GLYCOLYSIS |
| REACTOME_MITOCHONDRIAL_FATTY_ACID_BETA_OXIDATION | MM15462 | FATTY_ACID_BETA_OXIDATION |
| WP_FATTY_ACID_BIOSYNTHESIS | MM15885 | FATTY_ACID_BIOSYNTHESIS |
| HALLMARK_ESTROGEN_RESPONSE_EARLY | MM3872 | ESTROGEN_RESPONSE_EARLY |
| HALLMARK_ESTROGEN_RESPONSE_LATE | MM3873 | ESTROGEN_RESPONSE_LATE |